Castor canadensis (American beaver): 109700547
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Entry
109700547 CDS
T04791
Symbol
Nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04621
NOD-like receptor signaling pathway
ccan05132
Salmonella infection
ccan05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109700547 (Nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109700547 (Nod1)
05133 Pertussis
109700547 (Nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccan04054
]
109700547 (Nod1)
Pattern recognition receptors [BR:
ccan04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109700547 (Nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
CARD
LRR_6
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
AAA_22
RsgA_GTPase
ABC_tran
PIF1
AAA_25
Sigma54_CBD
Motif
Other DBs
NCBI-GeneID:
109700547
NCBI-ProteinID:
XP_020041344
UniProt:
A0A250Y613
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MEKQGHHEMQVVTADSQSHIKLLKIHRELLVTRIRNTQCLLDNLLENGYLSSEDVEIVCA
CPTQPDKVRKLLDLVQSKGEEVSEFFLFVLQQLADAYVDLRPWLVEISFSPSQIIQSKTV
VNTDPVSRYTQKLRQQLGCDSKFMLCYAQKEELLLEETYMDTLMELMGFNNESLGSLSGL
ACLLDHSSGVLNEHGETVFVFGDAGVGKSMLLQRLQSLWASGRLAVEVKFFFHFRCRMFS
CFKDSDTLCLQDLIFKHFCYPEQDPDEVFAFLLRFPQAVLFTFDGLDELHSDFDLSRVPD
SCCPWEPAHPLVLLANLLSGRLLKGANKLLTARTGVEVPRQLLRKKVLLRGFSPSHLRTY
AQRMFPERAAQDRLLEQLDANPNLCSLCAVPLFCWIIFRCFQHFLTAFEGSAQLPDCAVT
LTDVFLLVTEVHLNRTQPRSLVQRNTRSPAETFRAGWRTLRALGQMAHHGMARSLFVFSQ
EEVQASELQEGDLQLGFLRALSEMGPEGGQQSYEFFHLTLQAFFTAFFLVVDDKMGTREL
LRFFQEWVPPGEAATPSCYPPFLPFQCLGGGNPVRPEPFTKKDHFQFTNLFLCGLLAKAR
QKLLRHLVPAAALRRKRKVLWAHLFASLRSYLKSLPRLQSEGFSQVHAMPTFLWMLRCIY
ETQSQKVGRRAARGICANYLKLAFCNACSADCSALSFVLHHLRKQLALDLDNNNLNDYGV
RELQPCFSRLTIIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVARIL
DECRRLTHLKLGKNKITSEGGKCLAQAVKNSTSISDVGMWGNQIGDEGAKAFAEALRDHP
SLSYLSLAFNGISTEGGKSLAQALQQNSSLTIFWLTKNELNDEVAESFAEMLKVNQTLKH
LWLIQNQITAKGTAQLAEALQKNSSLTELCLNGNLIKPEEAKVFEDEKRLICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcagggccatcatgagatgcaagtcgtcacagcagattctcaatcccacatt
aaactgctgaagatccaccgggaacttctggtcactcgcatccgtaacacacagtgtctg
ctggacaacttgctggagaatggctacctgtcctctgaagatgtggagatcgtgtgtgcc
tgtcccacccagcctgacaaggtccgaaaacttctggatctggtacagagcaagggcgag
gaggtgtccgagttcttcctcttcgtgctccagcaactcgcagacgcctatgtggacctt
aggccatggctggtggaaatcagcttctccccttcccagatcattcagagcaaaactgtt
gtcaacactgacccagtgagcaggtacacccagaagcttcgacaacaactgggctgtgac
tccaagttcatgctgtgctacgcccagaaggaggagctgttgctggaggagacatacatg
gacaccctcatggagcttatgggcttcaacaacgagagtctgggcagcctgagcggcctg
gcctgcctgctggaccacagctcaggcgtcctcaacgagcacggtgagaccgtcttcgtg
ttcggcgacgcgggcgtgggcaagtctatgctgctgcagcggctgcagagcctctgggcc
tcgggccggctggccgtggaggtcaagttcttcttccacttccgctgccgcatgttcagc
tgcttcaaggacagcgacacgctgtgtctgcaggacctgatcttcaagcacttctgctac
ccggagcaggaccctgatgaggtcttcgccttcctactgcgctttcctcaggcggtcctt
ttcaccttcgacggcctggacgagctgcactcggacttcgacctgagccgcgtgccagac
agctgctgcccctgggagcccgcccaccccctggtcctgctggccaacctgctcagtggc
aggctgctcaagggcgccaacaagctgctcacggcccgcacgggcgtcgaggtcccgcgc
cagctcctgcggaagaaggtgctgctccgtggcttctcccccagccacctgcgcacctat
gcgcaaaggatgttcccggagcgcgccgcgcaggaccgcctgctggagcagctggacgcc
aaccccaacctctgcagcctgtgcgctgtgcccctcttctgctggatcatcttccgctgc
ttccagcacttcctcacggccttcgaaggctcggcgcagttgcccgattgcgccgtgacc
ttgaccgacgtcttcctgctggtcactgaggtccacctgaacaggacgcagccccgcagc
ctggtgcagcgtaacacgcgcagcccggctgagaccttccgcgctggctggcgcacgctg
cgcgcactgggtcaaatggcgcatcatggcatggcgcgaagcctcttcgtgttcagccag
gaggaggtgcaggcttcggagctccaggaaggggacctgcagctgggtttcctgcgggcc
ctatctgagatgggccccgaagggggacagcagtcctatgagtttttccatctcaccctt
caggccttcttcacagctttctttctcgtggtggacgacaagatgggcacccgggagctg
ctcaggttctttcaggagtgggtgcctcccggggaggcagcaaccccatcctgctatcct
ccttttctccccttccagtgcctggggggtggcaacccggtgcgccctgaacccttcacc
aagaaagatcactttcagttcaccaaccttttcttgtgtggactgctggccaaagccaga
cagaaactcctgcggcatctggtgccagctgccgccttgaggaggaaacgcaaggtcctc
tgggcccacctgtttgccagcctgcgctcctacctgaagagcctgccccggcttcagtct
gagggcttcagccaggtgcacgccatgcccaccttcctctggatgctgcgctgcatctat
gagacgcagagccagaaggtggggcgccgggcagcacgcggcatctgtgccaactacctc
aagctggctttctgcaacgcctgctcggcggactgcagcgccctatccttcgtcctgcac
cacttgcgcaagcagctggccctcgatctggacaacaacaacctcaacgactatggtgtg
cgcgagctgcagccctgcttcagtcgcctaaccatcatcagactcagtgtcaaccagatc
actgacactggtgtgaaggtgctgtgtgaagagctgaccaagtataagattgtgacattt
ttgggcttgtacaacaaccagatcacagacattggagccaggtatgtcgcccgaatcctg
gatgaatgcagacgcctcacacaccttaaactgggaaaaaacaaaatcacgagtgaaggt
gggaagtgtctggcccaggctgtgaagaacagcacatcgatctctgacgtggggatgtgg
ggcaatcaaattggggatgaaggagccaaagcgttcgcagaggcactgagggaccacccc
agcctgtcctacctgagccttgcattcaacggtatctccacagaaggagggaagagcctg
gcacaggccctgcaacagaactcatctctcacgatattctggctgaccaaaaatgaactc
aacgatgaagtggcagagagctttgcagaaatgttgaaagtcaaccagacactaaagcat
ttatggctgatccagaatcagatcacagccaaggggactgcccagttggcggaggccctg
cagaagaacagcagcctcacggagctttgtctaaatggaaacttgataaagccagaagag
gccaaagtgtttgaagatgagaagcgactcatctgtttctga
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integrated database retrieval system
