Castor canadensis (American beaver): 109700800
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Entry
109700800 CDS
T04791
Symbol
Cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109700800 (Cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109700800 (Cnot6l)
Enzymes [BR:
ccan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
109700800 (Cnot6l)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109700800 (Cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109700800 (Cnot6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
109700800
NCBI-ProteinID:
XP_020041708
UniProt:
A0A250Y2L7
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGKVRSLSTSLWSLTHLTALHLND
NNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNHNQLRVLPYELGRLF
QLQTLGLTGNPLSQDIANLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWIALKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP
EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN
GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK
GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPALLPL
VNGVHLPNRR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttataccatcatgtcagca
gaggaggtagccaatgggaaaaaatctcactgggcagaattagaaatctcgggtaaagtg
cggagcttaagtacatcactttggtcattgacacacttgacagcgctgcacctaaatgac
aataaccttactcgcattccacctgatattgccaagcttcataatctggtttacctggat
ttgtcatccaataaactcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaatcacaatcagttacgggttttgccttatgaacttggtcggctcttc
cagctacaaactctaggtttgacgggcaatcctttatcacaggatattgccaacttatac
caggacccagatggaacccgaaagctgctgaacttcatgcttgacaatcttgcagttcat
ccagagcagcttcctccgaggccatggattgcattaaaagaacgagaccaaattctgcca
tcagcatcattcacggttatgtgttataatgttttatgtgataaatacgctacccggcag
ctatatggctattgcccatcctgggcattaaactgggaatacagaaaaaagggaattatg
gaagaaattgttaactgggatgcagacatcattagtcttcaggaagtagaaacagagcaa
tacttcactctctttctgccagcattgaaggagcgtggatatgatggatttttttctcca
aagtcacgtgccaaaattatgtctgagcaggagagaaagcatgtggacggttgtgcaata
ttcttcaaaacagaaaaatttacgttggtgcaaaagcatacagtggaatttaatcaagta
gcaatggctaattcagatggatctgaagctatgttgaacagagtgatgacaaaagataac
attggagttgctgtggtattagaggtccacaaagaactatttggagcaggtatgaagcct
attcatgctgcagacaaacagctgcttatagtggcaaatgcccacatgcattgggatcca
gagtattctgatgtgaaacttatccagaccatgatgtttgtctcagaggttaaaaacatt
ctggagaaagcctcaagtaggcctggcagcccaactgcagatcctaattccatcccgctg
gtgctatgtgcagatcttaactcattgccagattcaggtgttgtggaatatttaagcaat
ggaggagtagctgacaaccataaagacttcaaggaactaaggtacaatgagtgtcttatg
aacttcagctgcaatggaaagaatggaagctcagaagggagaatcacacatggcttccaa
cttaagagcgcctatgaaaataacttgatgccttataccaattacacctttgatttcaaa
ggtgtgattgactacattttctattccaagactcatatgaacgtgcttggtgtcctgggg
cctttagatcctcaatggctggttgagaacaacatcactgggtgtccacaccctcacatc
ccttcagaccacttctcactgttaacacaacttgaactccaccctgcactcctgcctctt
gtcaatggtgttcacttacctaatcggaggtag
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