Castor canadensis (American beaver): 109701303
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Entry
109701303 CDS
T04791
Symbol
Vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04140
Autophagy - animal
ccan04148
Efferocytosis
ccan05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109701303 (Vps41)
04148 Efferocytosis
109701303 (Vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109701303 (Vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109701303 (Vps41)
Membrane trafficking [BR:
ccan04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109701303 (Vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
zf_RING_Vps8_fungal
TPR_PEP5_VPS11
Vps39_1
zf_RING_Vps8
zf-RING_5
zf-rbx1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109701303
NCBI-ProteinID:
XP_020042383
UniProt:
A0A250YKT5
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MNRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMY
PCSLCWKDNVTLIIGWGTSIKICSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLC
DQLVVLSYVKEVSEKTEREFCARPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLE
YSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKMLDIG
LAYVNHLVERGEYDIAARKCQKILGKNTALWEYEVYKFKEIGQLKAISPYLPRGDPVLKP
LIYEMILHEFLESDYEGFATLVREWPGDLYNNSVIVQAVRDHLKKDSHNKTLLKTLAELY
TYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKI
SIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHC
PLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWED
LILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLRE
GCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLAPVLPTDAAKPFSVVVFHCRHMF
HKECLPVPSMNSPSQYCNICSAKNRGPGSAILEMKK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatggaagtcttctgttctgcacgaaggggaagggaacatacggagtgtgaag
tggagaggccatctgattgcctgggccaataatatgggtgtgaagatttttgacatcatc
tcaaagcaaagaattaccaatgtgccccgggatgatataagtcttcgcccagatatgtat
ccctgcagcctctgctggaaggacaatgtgaccctgattattggctgggggacttccatc
aagatatgctcagtgaaggaacggcatgccagtgagatgagagatttgccaagtcgatat
gttgagattgtgtctcagtttgaaactgaattctacattagtggacttgcacctctctgt
gatcagcttgttgtgctttcctacgtcaaggaagtttcagaaaaaacggaaagagaattc
tgtgccagacctagactggatatcatccagccgctttctgagacttgtgaagagatctct
tctgatgctttgacagtcagaggctttcaggagaatgaatgtagagattatcatttagaa
tactctgaaggggagtcactcttctacattgtgagtccaagagatgttgtagtggccaag
gagcgagaccaagatgatcacatcgactggctccttgaaaagaagaaatacgaagaagct
ttgatggcagctgaaattagccaaaagaacattaaaagacataagatgctggatattggc
ttggcatatgtaaatcatctggtggagagaggagaatatgacatagcagcacgcaaatgc
cagaagattcttggtaaaaatacagcactgtgggaatatgaagtttataaatttaaggaa
attggacagcttaaggctattagtccttatttgccaagaggggatccagtcctgaaacca
ctcatctatgaaatgatcttacatgaatttttggaaagtgattatgagggttttgctaca
ctggtccgagaatggcctggagatctgtataacaattcagtaatagttcaagcagtccgg
gatcacctgaagaaagatagtcacaacaagactttacttaaaaccctggcagaattgtac
acctatgacaaaaactatggcaatgctctggagatatacttaacattaagacataaagat
gttttccaattgatccacaagcacaatcttttcagttctatcaaggataaaatagtttta
ttaatggactttgactcagagaaagctgttgatatgcttttggacaatgaagataaaatt
tcaattaaaaaagtagtggaagaattagaagacagaccagagttgcagcatgtgtatttg
cacaagctctttaagagagaccatcataaggggcaacgctaccatgaaaaacagatcagt
ctttatgctgaatatgatcgaccaaacttacttccctttcttcgagacagcactcattgc
ccacttgaaaaggctcttgagatctgtcaacaaagaaactttgtagaagagacagtctat
cttctgagccgaatgggtaatagccgaagtgccctgaagatgattatggaggaattacat
gatgttgataaagcaatcgaatttgccaaggagcaagatgatggagaactctgggaagac
ctgattttatattccatcgacaaaccaccatttattactggtttgttaaacaacattggc
acacatgttgacccaattcttctgattcaccgtattaaggaaggaatggagattcctaat
ttgagagattccttggttaaaattctgcaagattacaatttgcaaattctgcttcgtgaa
ggctgcaagaagattcttgtagctgactctttgtcattactgaagaaaatgcaccgaact
caaatgaaaggtgttctggttgatgaggaaaatatctgtgaatcatgccttgcccctgtc
cttcctacagatgcagctaagcccttcagcgtggtggtcttccactgccggcacatgttc
cacaaggagtgcctgcccgtacccagtatgaactctccttcacagtactgcaacatctgc
agtgctaagaatcgaggaccaggaagtgcaattctggagatgaagaaatag
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integrated database retrieval system
