Castor canadensis (American beaver): 109701836
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Entry
109701836 CDS
T04791
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-like
KO
K06252
tenascin
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04151
PI3K-Akt signaling pathway
ccan04510
Focal adhesion
ccan04512
ECM-receptor interaction
ccan04518
Integrin signaling
ccan05165
Human papillomavirus infection
ccan05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109701836
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109701836
04518 Integrin signaling
109701836
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109701836
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
109701836
09172 Infectious disease: viral
05165 Human papillomavirus infection
109701836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccan00536
]
109701836
Glycosaminoglycan binding proteins [BR:
ccan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109701836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
DUF7949
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
EGF
Fn3_Dep-1_1st
fn3_2
hEGF
NDNF
Motif
Other DBs
NCBI-GeneID:
109701836
NCBI-ProteinID:
XP_020042887
UniProt:
A0A8B7WGY6
LinkDB
All DBs
Position
Unknown
AA seq
1526 aa
AA seq
DB search
MGAVTWLLPGIFLALLALPSEGGVLKKVIRHKRQSGVNITLPEENQPVVFNHVYNIKLPM
GSQCSVDLESTNGEKDLAPPSETSGSFQEHTVNGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELEVLVSSLREQCTMGTGCCLQTAEGRLDTRPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCLDGQCVCDEGFTGEDCSQLACPSDCNDQGRCVNGVCVCFE
GYAGADCGQEVCPVPCSQEHGKCVDGRCVCQDGFAGDDCNEPLCLSNCYNRGRCVENECV
CDEGFTGEDCSELVCPNDCFDRGRCINGTCYCEEGFTGEDCATLTCPNACHGRGQCEDGQ
CVCDEGFAGADCSEKRCPADCHNRGRCLNGQCECDDGFTGVDCGELKCPNGCSGHGRCVN
GQCVCDEGYTGEDCSQQRCPSDCHNRGRCVQGKCLCEQGFKGFDCSDMSCPNDCHQHGRC
VNGMCVCDDGYMGEDCRDRRCPRDCSQRGRCVDGQCMCEHGFTGPDCSELSCPSDCHGQG
RCVNGQCVCHEGFMGKDCKERRCPGDCHGQGRCVDGQCVCHEGFTGLDCGQRSCPNDCSN
LGQCVSGRCICNEGYTGEDCSKVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLIVYTPTH
ADGLEMQFRVPGDQTSTTIQELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLKF
KSVKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQDYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQTEVKDITDTTALITWFKPLAEIDGIELSYGIK
DVPGDRTTIDLTHDENQYSIGNLKPDTEYEVSLISRRVDMSSNPAKETFTTGLDAPKNLR
RVSQTDNSITLEWRNVKAAIDNYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTE
YGIGVSAVKEDKESDPATINAATEMDAPKDLQISDTTEDSLTLVWRTPLAKFDRYRLNYS
LPTGQPVEVQLPRDTTSYILRGLEPGQEYTILLTAEKGRHKSKPARVKATTEQAPELENL
TVTEVGWDSLTLNWTTADQAYEHFVIQVQEANKVEATQNLTVPGSLRAADIPGLKAATPY
RVSIYGVIRGYRTPVLSAEVSTGEIPNLGEVTVANVGWDALKLNWTAPEGAYEHFFIQVQ
EADREEAAQNLTVPGGLRSMDLPGLKAATHYSITIRGVTRDFSTAPLSVEALTEEVPGLG
NLTVTELSWNALRLDWTTPDETYDQFIVQVQATDQVEEVHNITIPGSQHSMEIPGLRAGT
PYTITLHGEIRGSSTRPLAVEVITEELPQLGDLAVTEVGWDGLTLNWTTADQAYEHFVIQ
VQEANKVEAAQNLTVPGSLRAADIPGLKAATPYRVSIYGVIRGYRTPVLSAEASTAKEPE
IGSLNVSDITAESFNLSWTATDGVFETFTIEIIDSNRLLQSAEYNISGAERTAHISGLPP
STDFIVYLSGLAPSIRTKTISATATT
NT seq
4579 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgtgacttggctattgccgggcatcttcctagctttgcttgccctcccttcc
gaaggtggagtcctcaagaaagtcatccggcacaagcgacagagtggagtgaacatcacc
ctgccagaggagaatcagccagtagtgtttaaccatgtctacaacatcaagctgcccatg
gggtcacagtgttctgtagatctggaatcaaccaatggggagaaagacctggccccacca
tcagagaccagtggaagcttccaggaacacacagtgaatggggaaaaccaaatcgtgttc
acacaccgcatcaacatcccccgccgggcctgtggctgtgctgctgctcctgatgtgaag
gagctcctgagcaggctggaagagctggaggtcctggtgtcttccctccgggagcagtgc
accatgggaacaggctgctgtctccaaaccgcagaaggccgcctagacacgaggcccttc
tgtagtggccggggcaacttcagcactgaaggatgcggctgcgtttgtgaaccaggttgg
aaaggccccaactgctctgagcctgaatgtccaggcaactgtcacctccgaggccagtgc
cttgatggacagtgcgtctgtgatgagggcttcactggcgaggactgtagccagcttgcc
tgtcccagtgactgcaatgaccagggcaggtgtgttaacggggtctgtgtctgcttcgag
ggttatgcgggggctgactgcggtcaggaggtctgcccggtgccctgtagccaggaacat
ggcaagtgcgtggacggccggtgcgtgtgccaggatggctttgcaggggacgactgcaat
gaacccctgtgcctcagcaactgctacaaccgcgggaggtgcgtagagaacgagtgtgtg
tgcgacgagggcttcacaggcgaggactgcagcgagctcgtctgccccaatgactgcttt
gaccgtggccgctgtatcaacggaacctgctactgcgaggaaggctttactggtgaggac
tgtgcgacactcacctgccccaatgcctgccacggcaggggccagtgcgaggacggacag
tgcgtgtgtgatgagggcttcgcgggcgccgactgcagcgagaagaggtgtcccgccgac
tgtcacaaccgtggccgttgtctcaatgggcagtgtgagtgtgacgacggcttcacggga
gtggactgcggggagctcaaatgccccaatggctgtagtgggcacggccgctgtgtcaat
ggtcagtgcgtatgcgacgagggttacaccggtgaagactgcagccagcagaggtgtccc
agcgactgtcacaaccgaggccgctgcgtccagggcaagtgcttgtgcgagcaaggcttc
aagggcttcgactgcagtgacatgagctgccccaatgactgccaccagcacggccgctgt
gtgaatggcatgtgtgtctgtgatgacggctacatgggggaggactgcagggaccgcagg
tgcccccgggactgcagccagcggggccgttgtgtggacgggcagtgcatgtgtgagcat
ggctttaccggtccggactgctcagagctctcctgccccagcgactgccatggccagggc
cgctgtgtgaatgggcagtgtgtgtgccacgagggcttcatgggcaaagactgcaaggag
cgaaggtgtcctggagattgtcatggccagggccgctgtgtggatggccagtgcgtctgc
catgaaggcttcacaggtctggactgtggtcagcgttcctgccccaatgactgcagcaac
ttgggacagtgtgtctccggccgctgcatctgcaacgaaggctacacaggagaagactgc
tccaaggtgtcccctcccaaagatctcgttgtgacagaagtgacagaagagactgtaaac
ctggcttgggacaatgagatgcgggtcacagaatacctcattgtgtacacgcccacccat
gctgatggcttagaaatgcagttccgtgtgcctggggaccagacatccaccaccatccag
gagctggagcctggtgtggaatacttcatccgcgtgtttgccatcctggagaacaagagg
agcatccctgtcagtgccagggtggccacctatttgcctgcacctgaaggcctaaaattc
aagtccgtaaaggagacatcagtggaagtggagtgggatcctctagacatcgcttttgaa
acatgggagatcatcttccggaatatgaataaagaagatgagggagagatcaccaaaagc
ttgaggagaccagagacctcttacaggcaaactggtcttgcccctggacaagactatgaa
atatcactgcacattgtgaaaaacaatacccggggccctggcctgaagagggtgacaact
acccgcttggacgcccccagccagactgaggtgaaagacatcacagataccacagctcta
atcacctggttcaagcccctggctgagattgatggtatagaactctcatatggcatcaaa
gacgtgccaggcgaccgcaccaccattgatctcacacatgatgagaaccagtactccatt
gggaacctgaagccggacactgaatatgaggtgtctctcatttcccgcagggttgacatg
tcgagcaacccagccaaagagacctttacaacaggcctggatgctcccaagaatctccga
cgtgtctcccagacagacaacagcatcaccttggagtggaggaatgtcaaggcagccatt
gacaattacagaattaagtacgcacccatctctggaggtgaccatgctgaagttgatgtt
ccaaagagtcaacaagccacaaccaaaaccacactcacaggtctcaggccaggaactgaa
tatggcattggagtttctgccgtgaaggaggacaaggagagcgatccagcgacaatcaat
gctgccacagaaatggacgcacccaaggaccttcaaatttctgacacaacagaggacagc
ctgaccctggtctggaggacaccactggccaagtttgaccgctaccgcctcaactacagc
ctccccacaggccagccagtggaggtccagctgccaagggacaccacctcctacatcctg
agagggctggagcctggacaggaatacaccatcctcctcacagccgagaagggcaggcac
aagagcaagcctgcacgtgtgaaggcgaccaccgaacaagccccagagctggaaaacctc
acggtgactgaggttggctgggacagcctcacactcaactggaccacagctgaccaggcc
tatgagcattttgtcattcaggtgcaggaggccaacaaggtggaggccactcagaacctc
acagtgcccggcagcctgcgggctgcggacatcccaggcctcaaggctgccaccccttat
agagtctccatctatggggtgatccggggctataggacaccagtgctctctgccgaggtc
tccacaggggaaattcccaatttgggagaggtcacggtggccaatgtgggctgggatgcc
ctcaagctcaactggactgctccagaaggggcctatgagcactttttcattcaggtgcaa
gaggctgacagagaggaggcagcccagaacctcacagtcccaggaggactgaggtccatg
gacctgcctgggctcaaagcagccactcactatagcatcaccattcgtggggtcactcgg
gacttcagcacagcccctctctctgttgaagcgttgacagaggaggttccaggtctggga
aacctcacagtgaccgagcttagctggaatgccctcagactggactggaccacaccagat
gagacctatgatcagtttatcgttcaggtccaagcaactgaccaggtggaagaggttcac
aatatcaccattcctggcagccagcactccatggaaatcccaggccttagggctggcacc
ccctacacaattaccctgcatggcgagatcaggggcagcagcactcgaccccttgctgtg
gaggtcatcacagaggagctcccccagctgggagacttagccgtgactgaggttggctgg
gatggcctcacactcaactggaccacagctgaccaggcctatgagcactttgtcattcag
gtgcaggaggccaacaaggtggaggccgctcagaacctcacagtgcccggcagcctgcgg
gctgcagacatcccaggcctcaaggctgccaccccttatagagtctccatctatggggtg
atccggggctataggacaccagtgctctctgctgaggcctccacagccaaagaacctgaa
attggaagcttaaatgtttctgacataactgctgagagcttcaatctctcctggacagct
accgatggggtcttcgagacttttaccattgaaattattgattccaataggttgctgcag
tcggcagaatataacatatctggtgctgaacgaactgcccacatctcagggctcccccct
agtactgatttcattgtctacctctctggacttgcccccagcatccggaccaaaaccatc
agtgccacagccaccacag
DBGET
integrated database retrieval system
