Castor canadensis (American beaver): 109702133
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Entry
109702133 CDS
T04791
Symbol
Col6a3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04151
PI3K-Akt signaling pathway
ccan04510
Focal adhesion
ccan04512
ECM-receptor interaction
ccan04518
Integrin signaling
ccan04820
Cytoskeleton in muscle cells
ccan04974
Protein digestion and absorption
ccan05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109702133 (Col6a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109702133 (Col6a3)
04518 Integrin signaling
109702133 (Col6a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109702133 (Col6a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109702133 (Col6a3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109702133 (Col6a3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
109702133 (Col6a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccan04147
]
109702133 (Col6a3)
00536 Glycosaminoglycan binding proteins [BR:
ccan00536
]
109702133 (Col6a3)
Exosome [BR:
ccan04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109702133 (Col6a3)
Glycosaminoglycan binding proteins [BR:
ccan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109702133 (Col6a3)
Hyaluronan
Extracellular matrix or blood plasma proteins
109702133 (Col6a3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Motif
Other DBs
NCBI-GeneID:
109702133
NCBI-ProteinID:
XP_020043155
LinkDB
All DBs
Position
Unknown
AA seq
2603 aa
AA seq
DB search
MRKHRHLPLVVIFCLFLSGFPTTYAQQQQAVIEVNKRDIVFLMDGSSNMGLANFNAIRDF
IARVIQRLEIGQDLIQVSVAQYADTVKPEFYFNSYPGKREVISAVRRMKPLEGSALYTGS
ALDFVRDKLFVSSAGYRAAEGVPKILVLVTGGKSLDEISQPAQELKTSSIMAFAIGNKAA
DEAELEEIAFDRSLVFIAPEFRAVPLQSMLPSLLAPLRTLSGTTEESKRDILFLFDGSAN
IVGQFPAVRDFLYKIIDELNVKPDGTRVAVAQYSDDVKVESRFNEHPSKAEILSLVKKMK
IKTGKALNLGYALDYAQKYIFVKSAGSRLEDGVLQFLVLLVAGRSSDAVDGPASTLKQSG
VVPFIFQAKNADPAELDQIVPSPAFILTAESLPKIGDLQPQIVNLLKSVSNGAPAPVSGE
KDVVFLIDGSEGVRSGFPLLKDFMQRVVESLDVSPDRVRVAVVQYSDRTRPEFYLNSHMD
QQGVINAIRKLTFLGGPIPNTGAALDFVLRNILTSSTGSRMAEGVPQLLIVLTAERSGDD
VRGPSVILKRGGAVPIGIGIGNADISEMQTISFIPDFAVAIPTFHELGTVQQVISERVTH
LSREELSRLKPIFLPPSSPGVGGKKDVVFLIDGSQNASPEFQYIRLLIERMVDYLDVGFD
TTRVAVIQFSEDPKVEFPLNAHSSKDEVLSAVRRLRPKGGRQINIGGALEYVLKNIFRRP
LGSRIEEGVPQFLILISSGKSHDQVDDSAVELKQFGVAPFAIARHTDQEELVKISLSPEY
VFSVSTFRELPTLEQKLLTPITTLTAEQIQQILASTRYPPPAVESDAADIVFLIDSSDGI
RPDGIAHIRDFVSRIVQRLNIGPNRVRTGVVQFSNEAFPEFYLKTYKSQASVLDAIRRLR
FKGGSPRNTGKALEFVARNLFVKSAGSRIEDGVPQHLVLFLGGKSQDDISRISQVLSSSR
IASLGIGDRNTDRVELQTITNNPSLVFPVREFTELPNIEDRVMSSFGPSGATPAPLGVDT
PSPSRPEKKKADIVFLLDGSINFRRDSFQEVLRFASEIVDTVYEEGDSIQVGLVQYNSDP
TDEFFLKDFSTKRQIIDAINKVVYKGGRHANTRVGMEHLRLNHFVPEAGSRLDQRVPQIA
FVITGGKSVEDAQDASLALTQRGVKVFAVGVRNIDSEEVGKMASNSATAFRVGNVQELSE
LSEQVLETLHDAMHETLCPGVTDVSKACNLDVILGFDGSRDQNVFVAQKGLESKVDTILN
RISQMQRISCSGSQLPVVRVSVVANTPSGPVEAFDFAEYQPELFEKFQNMQNQHPYILTA
DTLKVYQNKFRQASPENVKVVIHFTDGVDGDLADLHRASEELRQEGVQALILVGLERVAN
LELLSQLEFGRGFMYDRPLRLNLLDLDYELAEQLDNIAEKACCGVPCKCSGERGDRGPIG
SIGPKGIAGEDGYRGYPGDEGGPGERGPPGVNGTQGFQGCPGQRGVKGSRGFPGEKGELG
EIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPKGEKGERGDVGIRGDPGDSGQDSQQR
GPKGETGDIGPMGVPGRDGASGSPGETGKDGGFGRRGPAGVKGNRGNPGQPGFEGEQGTR
GGQGPPGPIGPPGLIGEQGISGPRGGAGTAGAPGERGRTGPLGRKGEPGEPGPKGGIGNR
GPRGETGDDGRDGVGGEGRRGKKGERGFPGYPGPKGTPGEPGTDGAPGPKGVRGRRGNSG
PPGIVGQKGDPGYPGPSGHKGNRGDSIDQCALIQSIKDKCPCCYGPLECPVFPTELAFAL
DTSEGVTQDIFSRMRDVLLQIVGDLTIAESNCPRGARVAVVTYNNEVTTEIRFADSRKKS
ALLDSIQNLQVSLTSKQQSLETAMSFVARNTFKRVRNGFLMRKVAIFFSNKPTRESPQLR
EAVLKLSDAGITPLFLTSQEDRQLINALQINNTAVGHALVLPARGDLTDFLKNVLTCHVC
LDICNIDPSCGFGSWRPSFRDRRAAGSDADIDLAFILDSSESTTLFQFNEMKKYISYLVR
QLDLSPDPKASQHFARVAVVQHTPYESAGNASVPPGKVEFSLMDYGSKEKLLNFLSRGMT
QLQGTRALGRAIDYTIENVFESTPNPRDLKIVVLMITGEMQKQQLEEAQRAILQAKCKGY
FFVVLGIGRKVNVKEVYGFASEPNDVFFKLVDKSTELNEEPLMRFGRLLPSFVSSENAFY
LSPDIRKQCDWFQGDQPSRNGVKFGDKQVNFPNNVTSSPTSKPVTTTKPTMIVNLPPARP
APAKPASANSAPAKSAAEKPAPANPAPAKSAAEKPVPANPAPAKSAAEKPVPANPAPAKS
AVEKPMAAKPVATNTATVRPAVVAKPAAAKPAGAKPAVVRPPATAAKPAATKPEAPRPQA
KPAAATKSDTAKSVVKAYRDIQVSEVTENSAKLHWDRPEPPSSYFYDLTVTSAHDQSLVL
RQNLTITDRVIGGLLAGHTYHVAAVCYLRSQVKAIYQGSFSTKKTQPPPAQSSRSVSSSG
INLVVDMEPLSLTKTDICHLPKDPGTCRSFNLFWYYDPDTKSCGRFWFGGCGGNENKFKS
QEECEKVCAPVVPKPRVVNVMGT
NT seq
7812 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgacatttgcccttagtggtcatcttttgcctctttctctcaggcttt
cccacgacttatgcccaacaacaacaagcagtcatcgaagtgaacaagagggacatagtc
ttcctgatggatggctcatccaacatggggctagccaacttcaatgccatccgagacttc
atcgccagagtcatccagaggctggaaatcggacaagacctcatccaggtgtcggtggct
cagtacgcagacactgtcaagcctgagttttatttcaatagctaccctggcaaaagggaa
gtcataagcgctgtgcggaggatgaagcccctggaaggctcagccctatacacgggctct
gcactagactttgttcgtgacaaactgttcgttagctcagctggctacagggctgccgaa
ggggttcctaagatcctggtgctggtcacaggtggtaagtccctagatgagatcagccag
cctgcccaggagctgaagacaagcagcattatggcctttgccattgggaacaaggctgct
gatgaggcggagctggaagagatcgctttcgacagatccctggtgttcatcgcccctgag
ttccgcgccgtccctttgcaaagcatgctgcccagcctgctggcacctctcagaaccctc
tccggaaccactgaagagagcaagcgagacattctgttcctctttgatggctcagccaac
attgtgggccaattccctgctgtccgtgactttctctacaagatcattgatgagctcaat
gtgaagccagatgggaccagggtggcagtagctcagtacagtgatgacgttaaggtagag
tcccgcttcaacgagcatccaagtaaggctgagattctgagtcttgtgaagaagatgaag
atcaagacgggcaaagcccttaacctcggctatgccctggactacgcacagaagtacatc
tttgtgaagtctgcgggcagccgcctcgaggacggagtgcttcagttcctggtactgctg
gttgccggaaggtcatctgatgctgtggacggaccagcaagtaccctgaaacagagtggg
gtggtgcctttcattttccaagccaagaacgctgaccctgctgagctggaccagattgta
ccgtcccctgctttcatcctgactgcagagtcgctccccaagattggggatctccagcca
cagattgtgaacctcttgaaatcagtgagcaatggagccccagccccagtttcaggtgaa
aaagatgtggtgtttctgatcgatggctctgagggtgtcaggagcggcttccccctgctg
aaagactttatgcagagagtggtggagagcttggatgtgagccccgaccgtgtccgtgta
gctgtggtgcagtatagtgaccggaccaggcctgagttctacctgaattcccacatggac
cagcagggtgtcatcaatgccatccggaagctgaccttcctggggggaccgatccccaac
acgggggctgccctggactttgtcctaaggaacatcttgaccagctctactggaagcagg
atggcagagggcgtcccccagctcctgatcgtgctcacggctgagcggtctggggatgac
gtgaggggcccttctgtgatcctgaagaggggtggggcagtgcccataggcatcggtatt
gggaatgccgacatctcagagatgcagaccatttccttcatcccagactttgccgtggcc
atccccaccttccatgagctggggactgtccagcaggtcatctctgagcgggtgacccac
ctcagccgtgaggaactgagcaggttgaagccaatttttctgcccccatcaagcccaggt
gttggtggtaagaaggatgtggtctttctcattgatggatcccaaaatgctagccctgag
ttccagtacatccgcttgttgatcgagaggatggtcgattacctggatgtgggctttgac
accactcgggtggcggtgatccagttcagtgaggaccccaaggtggagtttccactgaat
gctcactctagcaaggatgaagtactgagcgctgtgaggcggctgcggcccaaaggcggg
aggcagatcaacattggaggtgccctggaatacgtgctgaagaatatcttcaggaggcct
ctgggcagccggatagaggagggtgttccacagttcctgatcctcatctcatctgggaag
tcccatgatcaggtggatgactcagctgtggagcttaagcagtttggggtggcccctttc
gccatagccaggcacacagaccaggaggagctggtgaagatctccctgagccctgagtac
gtgttctcggtgagcaccttcagggagctgcccaccctggagcagaaactgctgactccc
atcaccaccctgacggccgaacagatccagcagatcctggcgagcacgcgctatcctccc
ccagctgtcgagagtgacgctgctgacatcgtctttctaatcgacagctctgacggcatt
aggcccgatggcatcgctcatatcagagactttgttagcaggatcgtccaaagactcaac
attggccccaacagagtgaggactggcgttgtacagttcagcaatgaggccttcccagaa
ttctatttgaagacctacaaatcccaggcctcggtgctcgacgccatacggcgcttgagg
ttcaagggaggttctccacggaacactggaaaagctctggagtttgtggcaagaaacctc
tttgtgaagtctgctgggagtcggatagaagatggggtgccccaacacctcgtactgttt
ctgggtggaaaatcccaggatgacatttccaggatctctcaggtcctaagctcttctagg
attgcgagtttgggaataggagacagaaacactgacagggtggagctgcagaccatcact
aacaaccccagcttggtcttccccgtgagagagttcacagagttgcccaacatagaagac
agggtcatgagctcatttggaccctctggggctacacctgcacctctaggagtggacaca
ccttctccttcaaggccagagaagaagaaggcagatattgtgttcctgttggatgggtcc
atcaatttcagaagggacagcttccaggaagtgctccgttttgcgtctgaaattgtggac
acagtttatgaagagggtgactccatccaagtggggctggtccagtacaactctgacccc
acagatgaattcttcctgaaggacttctccaccaagaggcagattattgatgccatcaac
aaagtggtctacaaagggggtcgacacgccaacaccagggtgggcatggagcacctgcgg
ctcaatcacttcgtgcctgaggctggcagccgactggatcagagggttcctcagattgcc
tttgtgatcacaggaggaaagtcagtggaggatgcccaggatgcgagcctggcactcact
cagagaggtgtcaaggtgttcgcggtgggtgtgaggaacattgactcagaagaggtcgga
aagatggcatccaacagtgccacagcattccgggtagggaacgtccaggagctgtcagaa
ctgagcgagcaagttttggaaacactacatgacgctatgcacgaaaccctatgtcctggt
gtgaccgatgtttccaaagcctgtaacctggatgtgattctggggttcgatggatccaga
gatcagaatgtatttgtggcccagaagggcctcgagtccaaggtggacaccatcttgaac
agaatcagccagatgcagagaatcagctgcagtggcagccagctgcccgtcgttcgggtg
tcggtggtggccaacacaccctcaggcccggtggaggcctttgactttgctgagtaccag
ccggagctgtttgagaagttccagaacatgcagaatcagcacccgtacatccttacggcc
gacacgctgaaggtctatcagaacaagttccggcaggcctcacccgaaaacgtgaaggtg
gtcattcattttaccgatggagtggatggagacctggctgacttacacagagcttctgag
gagctccgacaagaaggtgtccaggccttgatcctggtgggtcttgaacgtgtagccaac
ctggagctgctgtcacagctggaatttgggcggggattcatgtatgacaggcccctgcgg
ctcaacttgctggacttagattacgaacttgcagagcagcttgacaacattgctgagaaa
gcttgctgtggggttccctgcaaatgctcaggagaaaggggagaccgaggacccattggc
agcattggaccgaagggcattgccggggaagatggctaccgaggctaccctggtgacgag
ggcggaccaggtgagcgaggtcctcctggtgtgaacggcactcaaggcttccagggctgc
ccaggccagagaggagtcaagggttcgcgaggattcccaggagagaagggcgaattagga
gaaatcgggctggatggtcttgatggagaagatggagacaaagggttgccgggttcttct
ggagagaaaggcaatcctggcagaaggggtgacaaaggaccaaagggagaaaaaggagaa
agaggagacgttgggattcgaggtgacccgggtgactcaggacaggacagccagcagaga
ggacccaaaggagagacgggtgacattggccccatgggtgtccctgggagagacggcgca
tctggaagtccaggagagactgggaaggacggtggctttggccgaaggggacctgcagga
gtgaagggcaacaggggcaatccaggccagccaggctttgaaggagaacaaggtaccaga
ggtggacagggcccacctggtcccattggtcctccaggcctgattggggaacaaggcatt
tctggacctcggggaggcgcaggtacagctggggctcctggagaacgtggcagaactggt
cccctgggaagaaagggtgagcctggagagccagggccaaagggaggcattgggaaccgc
gggccccgtggggagacgggagatgatgggcgagatggagttggaggtgaaggacgcaga
ggcaaaaaaggagaaagaggattccctgggtacccaggaccaaagggtacccctggtgag
cctgggacagatggtgcaccaggaccaaaaggtgtcagaggccgaaggggaaattcagga
cctccggggatagtaggacagaagggagaccctggctacccagggccatctggtcacaag
ggcaaccgaggcgactccattgatcaatgtgcgctgatccagagcatcaaggataaatgc
ccttgctgctatgggcccctggagtgccctgtcttcccgacagagcttgcctttgccttg
gacacctcagagggggtcacccaagacatctttagccggatgagagatgtgctgctgcag
atcgtgggtgatctgaccattgctgaaagcaactgcccgaggggggcccgagtagctgtg
gtcacctataacaatgaggtgaccaccgagatccgttttgctgactccaggaagaagtcc
gccctcttggacagcattcagaacctccaggtgtctctgacatccaagcaacagagtctg
gagacagccatgtcatttgtggccagaaacacgttcaagcgtgtgaggaacgggttcctg
atgaggaaagtggccattttcttcagcaacaagcccacaagagagtccccgcagctgcgc
gaggcggtgctcaaactctctgatgcaggaatcacacccttgttccttaccagccaggag
gaccgacagctcatcaatgccttgcagatcaacaacacagcagtggggcatgcactcgtc
ctgccggccaggggggacctcacagactttctgaagaatgtcctcacttgccacgtttgc
ctggacatttgcaacattgacccatcctgtggattcggcagctggagaccttccttcagg
gacaggagagcagcaggcagcgatgcagacattgacctggctttcatcttggacagctca
gagtccaccactctgttccagttcaacgagatgaagaagtatatcagctacctggtcagg
cagctggacctgagcccagaccccaaggcttcccagcactttgccagagtggctgttgtg
cagcacacaccctacgagtctgcaggcaatgccagcgtgccgcctgggaaggtggaattc
tccctgatggactatggctccaaggagaagctgcttaacttcctcagtagaggaatgaca
cagctgcagggaaccagggccttgggcagagctattgactacaccatagagaacgtcttt
gaaagtacacccaacccacgcgatctgaaaattgtggtgctgatgatcacaggtgagatg
cagaagcagcagctggaggaggcacagagagccatcctgcaggccaaatgcaagggctac
ttcttcgtggttctgggcattggccggaaagtgaacgtcaaggaggtgtatggcttcgcc
agtgagcccaatgacgtcttcttcaaactagtggataagtcaaccgagctcaatgaggag
cctttgatgcgctttgggaggctgttgccatcctttgtcagcagtgagaatgctttttac
ttgtctccagacattaggaagcagtgtgattggttccagggagaccaaccatcaaggaat
ggtgtgaagtttggtgacaaacaagtaaactttccaaacaatgttacttcaagtcctaca
tccaaaccagtgaccacaacaaaaccaacaatgattgtaaatctgccacctgcaaggcca
gcgcctgcaaagccagcctctgcaaattcagcccctgcaaaatcagctgctgaaaagcca
gctcctgcaaatccagcccctgcaaagtcagctgctgaaaagccagtccctgcaaatcca
gcccctgcaaagtcagctgctgaaaagccagtccctgcaaatccagcccctgcaaagtca
gctgttgaaaagcccatggctgccaagcctgtggccacaaacacagccacagtcagacct
gcagtggtggcaaagcctgcagcagcaaagcctgcaggggccaagccagcagtagtgaga
ccacctgccactgctgcaaagccagctgccaccaagccagaggctcccaggccacaggcc
aaaccagccgctgccaccaagtcagacactgctaagtctgtagttaaagcgtatcgagac
atccaagtgtctgaagtcacagagaacagcgccaaactccactgggacagacccgagccc
cctagttcttatttttatgacctcactgtcacctcagcccatgaccagtccttggttctg
aggcagaacctcacaatcactgaccgtgtcattgggggcctgctggctgggcacacatat
cacgtggcagctgtctgctacctgcggtctcaggtcaaagccatctaccaaggaagtttt
agtacaaagaaaactcagcctcctcctgcacagtcatcacggtcagtgtctagttcaggc
attaatctagtggtggacatggaaccgttatctcttactaaaacagatatatgtcacttg
ccgaaagatccaggaacatgcaggagttttaatctgttttggtactatgatccagacacc
aaaagctgcgggagattttggtttggaggttgtgggggaaatgagaacaaatttaaatca
caggaagaatgtgaaaaagtttgtgctcctgtggtccccaaacccagagtcgtcaatgtg
atgggaacctag
DBGET
integrated database retrieval system
