Castor canadensis (American beaver): 109702606
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Entry
109702606 CDS
T04791
Symbol
Pcdhb1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccan04515
]
109702606 (Pcdhb1)
Cell adhesion molecules [BR:
ccan04515
]
Cadherins
Protocadherins
109702606 (Pcdhb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ly49
Motif
Other DBs
NCBI-GeneID:
109702606
NCBI-ProteinID:
XP_020043493
UniProt:
A0A8C0ZQ25
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MEVERRKPLQSRRVGSLLLFVCVSVGGAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGATLVSEGNKLHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRVE
VRVFDINDNAPVFLNKAPVLKIPESTPLGSRFPLQSAEDLDVGINGLQNYTLSANTYFHL
HTRFRSHGPKYAELVLDKPLDRELQPEVNLTIMAVDGGSPPKSGTAHIRVVVLDVNDHVP
QFSRLVYRAQVPENSANGSFVAVVTATDLDEGNNKQITYSLAQNSEAILQTFQIDSQTGE
VRLRGPLDFETIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFTIRDRDIRVGGKITCFLREDFPFVVKPTFRNSYSLLTDRSLDREDVSGYNI
TIVAMDTGPPNLSTETVIEVLISDINDNTPGFQEDSYILTIRENNSPAVFIGKVQAEDLD
LGENAHVTYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFP
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDLGLFSVQPQNGEIHTLRKISERDLMMQKLIILVQDHGQPALSTTASLN
ILLVDGFSEPYLRFRDPSKNSGKVNPTTKYLVISLAVLSFLFLLSVTVIFIIHIYQKIKH
RDKFTIQEHFYDDCNFPNNLVQGGNGTLSQPCHYEMCSATGTGTSEFRFLKHFMPNFPFS
HANGEVKTEDCSSLPADSSRNRSRASESHARVTDEYM
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagcgcagaaaacctttgcaaagcaggcgagtggggtctcttcttcttttc
gtgtgtgtatctgtggggggtgcggccaccatccgctattcggtggcggaggagatggag
agcggctcgtttgtggccaatgtggctaaagacctagggctggaggtagggaagctggct
gcgcgcggggctacgctggtttctgagggcaacaagctgcatttccggctccaccgcaag
acaggagatttgtttgtgaaggagaaactggatagggagtcactttgtggcaaagccgac
ccatgcgtattgcactttgaaattgttctggtggagccactgcagtctttccgtgtagaa
gtcagagtatttgatatcaatgacaatgccccagtttttctaaacaaagcgcctgtttta
aagattccagaaagcacccccttgggttcacgttttcctctgcagagcgccgaggatctg
gacgtgggcatcaacggtctgcaaaactacacgcttagtgccaacacgtatttccacctg
cacacccgcttccgcagccacgggcccaaatatgcggagctagtgttggataaacccctg
gacagagagttgcagcctgaagtcaatttgacaattatggcggtggacggcgggtcccct
cccaagtctggcaccgcccacatccgagtagtggttctggatgtcaacgaccacgtgccc
cagttctcgcgcctggtgtatcgtgctcaggtgccagagaacagcgccaacggttctttc
gtggctgtggtgactgccacagacctagatgaaggcaacaacaagcagataacttactcg
ttagctcaaaactcagaagcaattctccaaacatttcagattgactctcaaactggagaa
gttcgactccgagggcctctagattttgaaactatagaaacatatgacattgatatccaa
gctacagatggaggaggactttcagcccacagcaaagtcctggtggaagtggtggatgta
aatgacaatcctcctgaagtgacagtttcttctgtgtccagtcctcttcctgaggactca
ccactacagacagtggtggccctcttcaccatccgagacagggacattcgagtgggagga
aaaatcacctgcttcctcagggaagactttccctttgtagtcaaacctacatttcggaat
tcttactcactgctcactgacagaagcttggatcgggaggatgtttcaggctataatatc
accattgttgccatggatactggaccgcccaacctgtctacagagactgtgatagaggtg
ctaatatctgacattaatgacaatactccagggtttcaggaagattcctacatcttgacc
attagagaaaacaacagccctgcagtttttattggcaaagttcaggctgaggatcttgac
ttgggtgagaatgcccatgtaacatattctctgctgcctccaaaaagtggagatctatca
gtctttgcttacatctccataaattcagacaatggaaaactctatgcactgagaaccatg
gattatgaggccatccaagattttcaatttgtggtaaaggcaactgatgggggtttccca
tcactgagcagtcaagttactgtcagagtggttgttctggatgacaatgacaaccgtcca
atgatcttgtacccactgcagaatggcactttgccctgcaatgatctggtgcctaggtca
gcagaggcagggtacctggtgaccaaggtagttgctgttgatggtgactcaggtcagaat
tcttggctttcataccacttacttaaagccactgaccttggattattttctgttcaacca
caaaatggggaaatccatacattgaggaaaatatctgagagagacctaatgatgcagaaa
ctgatcattcttgttcaggatcatggccaaccagctctctccactactgcttcactcaac
attttgctggtagatggcttttcagagccctacctgcggttccgggatccatccaagaat
tctggaaaggtaaatccaaccacaaagtatttggtcatctctctggctgtgctttccttt
ctctttctcctttctgtcacagtgatcttcattatacacatctaccagaaaattaaacat
agagacaagttcacaattcaagagcatttctatgatgactgtaatttccctaacaacctt
gtacaaggaggcaatggaaccttatcccagccttgtcattatgaaatgtgctcagccact
ggcactggcactagtgagttccggtttcttaagcactttatgcccaatttccctttctct
catgccaatggagaggtaaaaacagaggattgttctagtttacctgcagattctagtagg
aataggtctcgagcatcagagagccacgccagggtcactgatgaatatatgtag
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