Castor canadensis (American beaver): 109702923
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Entry
109702923 CDS
T04791
Symbol
Pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccan04121
]
109702923 (Pdzrn4)
Enzymes [BR:
ccan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109702923 (Pdzrn4)
Ubiquitin system [BR:
ccan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109702923 (Pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_6
zf-rbx1
Sina_ZnF
zf-TRAF
TRAF3_RING
Tricorn_PDZ
zf-RING_16
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
109702923
NCBI-ProteinID:
XP_020043745
UniProt:
A0A8B7WJC0
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MSFALERFAQAVDPALQCKLCGQVLEEPLCTPCGHVFCASCLLPWAARRRHCPLGCQQLV
PGELYRVLPLRSLLRELRIQCDYRARGCGHTVPLRELEAHVEGCAFGPASRGHNRWGCAL
GQGCSGGGGDRPQLGRSGPETQGTCAGTPGPRTGSGGGGLGPRPELLAFTRRERTLRAQL
WALQGEAQLAARRYREKFAQYMAHIRNFARDLGGNRRDGAQKSFTVVLERENDTLGFNII
GGRPHQTNHEEPATEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVEAF
RNAKEPIVVQVLRRTPLSRPTYGTVPEVQLMNASTQTDITFEHIMALAKLRPPSPPVPDI
CPFLLSDSCHSLHPMEHEFYEDNEYLSGLPADADRTEDFEYEEVELCRVSSQEKLGLTVC
YRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECKRI
VLLVARPEIQLDEGWLEDERNEFLEELNLEALEEQHNEAMQHTANEVEQPKKQEEEEGTT
DTATSSSNNHEKDSGVGRTDESLRNEESSEQENAAEDPNSTSLKSKRELGHSQDTLGSVE
LQCNESFVSGEYIDSDCVGNHNEECDRFRQLLELKCKIRNHGEYDLYYSSSTIECNQGER
EGVEHELQLLNEELRNIELECQNIMQAHRLQKVTEQYGDIWALHDGGFRNYNTSLDMQRG
KLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTTAAH
QSSSGQGSKESTSTKVKSTEQGCGIESQEKILESKKLPDHEKTVSEHIPYLSPYHSSSYR
YANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKGSEPKMEWKVKIRSDGTR
YITKRPVRDRILRERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRR
REFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAK
SPDGTRIHNAFLSVTTV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgccctggagcgctttgcccaagcggtggacccggctttgcagtgcaagctg
tgtggccaggtgctggaggaacccctgtgcacgccctgcgggcacgtcttctgtgccagc
tgcctgctgccctgggcggcgcggaggcgccactgcccgctcgggtgccagcagttggtg
cctggcgagctgtaccgcgtgctgccgctgcgcagcctcctccgcgagctgcgcatccag
tgtgattaccgcgcacggggctgcggccacacggtcccgctgcgggaactggaggctcac
gtcgagggctgcgcctttggtcctgccagccggggacacaatcgctggggctgcgccctg
ggccagggctgcagtggaggcggcggggaccggccccaactggggcgcagcggaccagag
acccaggggacgtgcgcggggacacccgggccccgtactggcagcggcggcggcgggctg
gggccccggcctgagcttctcgccttcacgcggcgggagaggacgctgcgggcacagctc
tgggcgctgcagggcgaggcgcagctggcagcccgcaggtaccgagagaagttcgcccag
tacatggctcacatccgcaacttcgccagggacctgggcggcaaccgcagggatggagcg
cagaagtcattcaccgttgtgttagaaagagaaaatgacaccttgggattcaatattata
ggaggtcggccacatcagactaatcatgaagaaccagcaactgaaggaatttatgtctca
aaaattttagaaaatggacctgctgacagagctgatggcctagagattcatgataaaatc
attgaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtggaagctttt
cgaaatgcaaaggagcccattgtggtacaggtgttaaggcgaacacccctgagtagacca
acctacggcacagtcccagaagtacagctcatgaatgccagcacacagacagacatcacc
tttgaacacatcatggccctggccaaactccgaccaccttctcctccagtgccagacatc
tgtccatttctgctctcagacagctgccattcacttcatccaatggagcatgaattttat
gaagacaatgagtatctttctggcttgcctgctgacgcagacagaacagaggactttgaa
tatgaggaggtggagttgtgtcgtgttagcagtcaggagaagcttggcctgacagtctgc
taccggacagatgatgaagaagacactggcatttatgtcagtgaggtagatccaaacagc
attgctgccaaagatggccgaattcgagaaggggatcgtattttgcaaataaatggggaa
gatgtccagaatcgagaagaagcggtagcactgctgtctagtgatgagtgtaagagaatc
gtgcttcttgtcgcaaggccagagattcagctggatgaaggctggctggaagatgaaagg
aacgaattcttagaggagttaaacttggaggcattggaggaacagcataatgaagcaatg
cagcatactgccaatgaggtggagcagccaaaaaagcaagaagaagaagaaggcacaaca
gacacagcaacctcctcctccaacaaccatgagaaggacagcggagtgggtcgcacagac
gaaagcttgcggaacgaggagagctcagaacaggagaatgcagccgaggaccccaacagc
acatctctgaagagcaagagagagctggggcacagccaggacaccctagggagtgttgag
cttcagtgcaatgaaagctttgtgtctggtgagtacattgattcagactgtgttggcaac
cacaacgaggagtgtgaccgattccggcagctcttggaactcaaatgcaagattcgaaac
catggagagtatgacctgtattactcaagcagcacaattgaatgcaatcagggggagcgg
gagggagtggagcatgagctccagttgcttaatgaagaactaagaaacattgagcttgag
tgccagaatatcatgcaggctcacaggctccagaaagtgacagagcaatacggagacatc
tgggcgttgcatgatggaggattccgaaattataacaccagcctcgatatgcaaagggga
aagctagatgatatcatcgaacatccggaaaagtcagataaggatagttctagtgcttac
aacacagccgaaagctgcagaagtactccactaactgtagaccgttccccggacagttcc
cttccaagaatgatcaacctcaccaataagaaaaacctgagaagcacaactgcagcccat
cagtcctcttctggacaaggcagcaaagagtccacatccaccaaagtcaaaagcaccgag
caaggttgtggcattgaaagccaggagaagatcctggaaagcaagaagcttccagatcat
gagaagacagtcagcgagcacatcccttacctgtccccttaccatagctcctcttacagg
tatgcaaacatcccagcacatgcccgacattatcaaagctacatgcagttaattcaacag
aagtctgctgtggagtatgcccagagccaactcagtttggtgagcatgtgcaaggagtct
cagaagggttcagagcccaagatggaatggaaagttaaaattaggagcgatgggaccagg
tacatcaccaagagaccagtgcgagaccgaattctgagggaacgtgccttaaagattaag
gaggaacggagtggcatgacaacagatgatgacaccatgagcgagatgaagatggggcgt
tactggagcaaagaagagagaaagcaacacctggttcgagccaaagagcagcgtcggcgc
cgagagttcatgatgaggagcaggctggagtgtctcaaggagagcccacagagtggtagt
gagggcaagaaggagatcaacatcattgaactgagtcacaaaaagatgatgaaaaagaga
aacaagaaaattttggataactggatgacaatccaagaactgatgacccatggggccaag
tcccctgatggcacgaggattcacaatgccttcttgtcagtcaccactgtatga
DBGET
integrated database retrieval system
