Clavibacter capsici: AES38_02890
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Entry
AES38_02890 CDS
T05227
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ccap
Clavibacter capsici
Pathway
ccap00040
Pentose and glucuronate interconversions
ccap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AES38_02890
Enzymes [BR:
ccap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
AES38_02890
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
ALD14064
LinkDB
All DBs
Position
complement(568916..570364)
Genome browser
AA seq
482 aa
AA seq
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MAAHPPAAATTRHPASASATGATGDRRTVTEPVSPATTCATVAAQLDMPDRSASAADEAA
APDTARIQAALDSCAQSGTAVVSVRLASSSRGASFLSGPLQLRQGETLVLDPAVTLFGSR
NPADYQVPKGPRCGTIGGSGKGCAALITATAPHAGVASRGGLDARRGRVDGRGDHAILGG
TTTWWQLSDQARAGGSQNEPRLIQATGADDFTLHDVDLVDAPKFHVSFQDADGFTAWGVR
IQTPATARNTDGIDPAGATDVTIAHSYVSDGDDGIAIKGGTSASSHISIIDSHFYGTHGI
SIGSEVTAGVSDVLVTGSTVSGTDAYGTASPSSAGVRIKSNPLVGGPVTGVTYRDVCLSR
TQAPVVFDTHYAGGTGSAIPSFSDIVVDGLRAVDSPSKAVSTLAGYDDDHRLGVSLSRVA
VDAPSVTAAYADIATAGATFGGSPLTSKRADVHVTASASAGAAPTCAFPAFPLLSGLAPT
AP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ctggccgcccatccgcccgccgccgcgaccacgaggcatcccgcatccgcctccgccacc
ggcgcgacgggcgaccgccgcaccgtcaccgagcccgtctcccccgccaccacctgcgcg
accgtcgccgcgcagctcgacatgccggaccgctccgcgtccgccgcggacgaggccgcg
gcgcccgacaccgcccgcatccaggccgcgctcgactcctgcgcgcagtccggcaccgcc
gtcgtgtccgtgcggctggcctcctcgagccggggcgcgagcttcctcagcgggccgctg
cagctgcgccagggcgagacgctggtgctggatcccgcggtcaccctcttcgggtccagg
aaccccgccgactaccaggtcccgaaggggccgaggtgcggcaccatcggcggatccggc
aagggctgcgcggcgctgatcaccgcgaccgcgccgcacgcgggcgtcgcctcccgcggc
ggcctcgacgcccgccgcggacgcgtcgacgggcgcggggaccacgcgatcctcggcggc
acgacgacctggtggcagctctccgaccaggcccgtgcgggcggctcgcagaacgagccc
cggctgatccaggccaccggcgccgacgacttcacgctccacgacgtcgacctcgtcgac
gcccccaagttccacgtgtccttccaggacgccgacggcttcacggcgtggggcgtgcgg
atccagacgcccgccaccgcccgcaacacggacggcatcgacccggcgggcgcgaccgac
gtgaccatcgcgcactcgtacgtctcggacggcgatgacgggatcgcgatcaagggcggc
acgagcgcgtcgagccacatcagcatcatcgacagccacttctacggcacgcacggcatc
tcgatcgggagcgaggtgaccgccggcgtgagcgacgtgctcgtcacgggatccaccgtc
tcgggcaccgatgcctacggcaccgcgagcccctccagcgccggcgtgcgcatcaagagc
aacccgctggtgggcggcccggtcacgggcgtgacctaccgcgacgtctgcctcagccgc
acccaggcgccggtggtgttcgacacgcactacgcgggcggcaccggcagcgcgatcccg
tccttcagcgacatcgtggtcgacggcctccgcgccgtggactccccgtcgaaggccgtc
tcgacgctcgccgggtacgacgacgaccaccggctcggcgtctcgctctcccgcgtcgcc
gtcgacgcgccgtccgtcacggccgcctacgcggacatcgccacggcgggcgcgaccttc
ggcggatccccgctcacctcgaagcgggcggacgtgcacgtcaccgcctcggcgagcgcg
ggtgccgcgcccacgtgcgcgttcccggcgttcccgctcctgtcggggctcgcccccacc
gcgccctga
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