Clavibacter capsici: AES38_02920
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Entry
AES38_02920 CDS
T05227
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_02920
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AES38_02920
Archaeal homologous recombinant proteins
AES38_02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALD12023
UniProt:
A0AA86GAV1
LinkDB
All DBs
Position
complement(575869..578856)
Genome browser
AA seq
995 aa
AA seq
DB search
MDLHRLTLQAIGPFAGEHVIDLAELGRSGLFLLEGPTGSGKSTLIDAVVFALYGSLASDG
SSRDRLHSHHAAPGVEPYVELVFETAAGIHRVRRSPQHQRPKRSGTGTTNQNATATLVRL
SSPDADAGEVVGTSTQEVGTEIARIVGLTRAQFVQTVVLPQGEFAEFLRSTGEQRRLVLQ
SLFGTAVYERTARQLAEMRTAAKARTDAADARVAEALTGLREAARVDALDVADAPDTVRL
LAELADAAEAAREEDERTRHDAATALADAERVTRALARRRALMEREAAVQDAAAGIRDLT
ERVAEARRAASVVGPLAARDRSEAARLAAAEADDEARAACREERPTLADAPPAELADRRD
ALVAELATLADAEARERGLPRRVADVRAAEDAVAAREAEAEEADAALAERPAERIPLVEA
RDAAAAAAGGVDAARAGLAEAEATRRRVDELTELEARIAAARAALDARSADATAAVQREA
ELRQRKIRGLAGELARELEEGAPCPVCGAVDHPRPAPSAPGHPDDEEIEAAADARARAER
AQGDAVAALSAATARHEVAQAALGGITREAADAEVAARATLLADAEAAGGALREAEAALV
AHDAGTERIRARRDDARAALSGLRERAARARELRAEDEAAVRAVLGEEDAGGSRVAALVA
DRAAERALVERLVALAATRERTAADADARAAELVEALAAGSFATEADARAAALPPADLEA
HARRVAEHEREQAVVAEGLVDPDVAALTGAEDADPYAARAALDAAQAAARTSAERAARAR
DRADRSASALARHDDARRESARAGDQARAAIRMSEVANATTPENSRGVTLGTYVLLRRFE
DVVRAANARLRVMSSGRYELEVSEEREATSRSRKTGLALQIRDHVVDRVREPASFSGGET
FYASLSLALGLADVVQAEAGGLQLGTLFVDEGFGTLDPETLDAVMSELGRLSSDGRTVGI
VSHVEELKQRVADRIEVRRRADGSSTLTSTVTDPA
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcaccggctcacgctccaggccatcgggccgttcgccggcgagcacgtcatc
gacctcgccgagctcgggcggtcggggctgttcctgctggaggggcccaccggatccggc
aagtcgacgctcatcgacgccgtcgtgttcgcgctctacgggtcgctcgcgagcgacggg
tcgagccgcgaccgcctgcacagccaccacgcggcacccggcgtggagccgtacgtggag
ctcgtgttcgagacggccgcggggatccaccgggtgcgtcggagcccgcagcaccagcgc
ccgaagaggagcggcacgggcaccacgaaccagaacgcgacggcgacgctcgtgcggctg
tcgtcgccggacgccgacgcgggcgaggtcgtcggcaccagcacgcaggaggtgggcacg
gagatcgcgcgcatcgtcgggctcacgcgcgcgcagttcgtgcagaccgtcgtgctgccg
cagggcgagttcgccgagttcctgcgctcgacgggcgagcagcggcggctcgtgctgcag
tcgctgttcggcacggcggtgtacgagcggaccgcgaggcagctcgccgagatgcgcacg
gccgcgaaggcgcgcaccgacgccgccgacgcgagggtcgccgaggcgctcaccgggctg
cgcgaggcggcgcgggtggatgcgctcgacgtcgccgacgcgcccgacaccgtgcggctg
ctggccgagctggccgatgcggcggaggcggcgcgcgaggaggacgagcggacccggcac
gacgcggcgacggccctcgcggacgccgagcgggtcacccgggcgctcgcccggcgacgg
gcgctgatggagcgcgaggcggccgtgcaggacgcggccgcggggatccgggatctgacg
gagcgcgtggcggaggcgcggcgcgcggcgtcggtcgtcggcccgctcgcggcccgcgac
aggtcggaggcggctcgcctcgccgccgccgaggccgacgacgaggcccgcgcggcgtgc
cgggaggagcggccgacgctggccgacgccccacccgcggagctcgccgaccggcgtgac
gcgctcgtggccgagctggcgacgctggccgacgcggaggcgcgggagcgcggcctgccg
cggcgcgtcgccgacgtgcgcgcggccgaggacgccgtcgcggcgcgcgaggcggaggcg
gaggaggcggacgcggcgctcgcggagcggccggccgagcggatcccgctggtcgaggcg
cgcgacgccgccgcggccgccgcgggcggggtcgacgccgcgcgcgccggcctggccgag
gcggaggcgacccggcggcgcgtggacgagctgacggagctggaggcgcggatcgccgcg
gcccgcgccgccctcgacgcgcgctccgccgacgcgaccgcggccgtgcagcgcgaggcg
gagctgcggcagcgcaagatccgggggctggcgggcgagctggcgcgggagctcgaggag
ggcgcgccctgccccgtgtgcggcgccgtcgaccacccgcggccggccccgagcgcgccc
ggccaccccgacgacgaggagatcgaggcggccgccgacgcgcgcgcccgcgccgagcgg
gcccagggggacgcggtcgccgcgctctcggcggcgaccgcgcggcacgaggtggcgcag
gcggcgctcggcgggatcacgcgcgaggccgccgatgccgaggtggcggctcgcgcgacc
ctgctcgcggacgccgaggcggcaggcggcgcgctgcgcgaggcggaggcggcgctcgtg
gcgcacgacgccgggacggagcggatccgcgcccgccgcgacgacgcccgggcggcgctc
tccgggctccgcgagcgcgcggcccgggcccgcgagctccgcgcggaggacgaggcggcc
gtgcgcgcggtgctcggcgaggaggacgcgggcggctcccgtgtcgcggccctcgtcgcc
gaccgggccgcggagcgcgccctcgtcgagcgcctcgtcgccctcgccgcgacccgcgag
cgcacggccgccgacgccgacgcacgcgccgccgagctcgtcgaggccctggccgcgggg
tccttcgcgaccgaggccgacgcgcgcgccgccgccctgccgcccgccgacctcgaggcg
cacgcccgccgggtcgccgagcacgagcgggagcaggccgtggtcgcggaggggctggtg
gatccggacgtcgcggcgctcacgggcgccgaggacgcggatccctacgccgcgcgcgcc
gccctcgacgccgcccaggccgccgcgcgcaccagcgccgagcgcgccgcccgcgcccgc
gaccgggccgaccgcagcgcgtccgccctcgcccgccacgacgacgcccgccgcgagagc
gcccgggcgggcgaccaggcgcgcgccgcgatccgcatgtcggaggtcgccaacgcgacg
accccggagaacagccgcggcgtcaccctgggcacctacgtgctgctgcgccgcttcgag
gacgtggtgcgggccgccaacgcgcgcctcagggtcatgtcgagcggccgctacgagctc
gaggtgagcgaggagcgggaggcgacgagcaggtcgcggaagacggggctcgcgctgcag
atccgcgaccacgtcgtcgaccgcgtgcgggagcccgccagcttctccggcggcgagacg
ttctacgcgtccctcagcctcgcgctcggcctcgccgacgtggtgcaggccgaggccggc
gggctgcagctcggcacgctcttcgtcgacgaggggttcggcacgctggatccggagacg
ctcgacgcggtcatgtccgagctcgggcggctctcgtccgacggccgcacggtcggcatc
gtcagccacgtcgaggagctgaagcagcgcgtggccgaccggatcgaggtccggcggagg
gcggacgggtcgtcgacgctcacgtccacggtcaccgacccggcgtga
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