Clavibacter capsici: AES38_03875
Help
Entry
AES38_03875 CDS
T05227
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccap03000
]
AES38_03875
Transcription factors [BR:
ccap03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AES38_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ALD12177
LinkDB
All DBs
Position
complement(787218..788237)
Genome browser
AA seq
339 aa
AA seq
DB search
MSAIADVARLAGVSKATASRALSGRGYVSPATRTRVSEAAAEIGYVVSSNASSLVTGQSK
NVGVVLPFINRWFFAELLEGIEEALIEADYDLTLYRLTDDPEQRRKVFEYFLVRKRVDAV
IAVSVALTPAEVVRLRRLDKPLVGIGGPVEGMSTLSIDDEAAARLATEHLLRLGHARVVH
LGGDLHAQMAFFVHAKRLAGYRAAIDADPRGLEARFATADFTIDGGFRSAMALLADPRSR
PTAVFAASDEIAIGTILAARQLGIAVPAELSVAGIDGHALAPLFGLTTVEQHPRRQGRAA
VGMVLEGLAPGGAAERTETMPVDFAARASTTAPPAPPAP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatcgccgacgtcgcccgcctcgccggggtctcgaaggccaccgcgtcgcgc
gccctcagcggccgcggctacgtctcccccgccacgcgcacccgggtctccgaggcggcg
gccgagatcggctacgtcgtctcctcgaacgcctccagcctcgtgaccggccagtcgaag
aacgtcggcgtcgtgctccccttcatcaaccgctggttcttcgccgagctgctcgagggg
atcgaggaggcgctcatcgaggccgactacgacctcacgctctaccgcctcaccgacgac
ccggagcagcgccggaaggtgttcgagtacttcctggtgcgcaagcgcgtggacgcggtg
atcgcggtgagcgtcgcgctcacgccggccgaggtcgtgcggctgcgccgcctcgacaag
ccgctcgtcggcatcggcggaccggtcgagggcatgagcacgctcagcatcgacgacgag
gccgccgcacggctcgcgaccgagcacctgctgaggctcggccacgcgcgcgtggtgcac
ctcggcggcgacctgcacgcgcagatggccttcttcgtgcacgccaagcggctggcgggc
taccgggcggcgatcgacgcggatccccgcgggctcgaggcgcgcttcgccacggcggac
ttcacgatcgacggcggcttccgctccgcgatggcgctgctggcggatccgcggagccgc
ccgaccgcggtcttcgcggcctccgacgagatcgccatcggcacgatcctcgccgcgcgg
cagctggggatcgcggtgccggccgagctctcggtcgcgggcatagacgggcacgcgctg
gcgccgctgttcgggctgacgaccgtggagcagcacccgcggcggcagggacgggcggcc
gtgggcatggtcctcgaggggctcgcaccgggcggcgccgcggagcgcaccgagacgatg
cccgtcgacttcgcggcccgcgcgagcacgacggcgcccccggccccgcccgcaccgtga
DBGET
integrated database retrieval system
