Clavibacter capsici: AES38_05350
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Entry
AES38_05350 CDS
T05227
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ccap
Clavibacter capsici
Pathway
ccap00300
Lysine biosynthesis
ccap00470
D-Amino acid metabolism
ccap01100
Metabolic pathways
ccap01110
Biosynthesis of secondary metabolites
ccap01120
Microbial metabolism in diverse environments
ccap01230
Biosynthesis of amino acids
Module
ccap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AES38_05350
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AES38_05350
Enzymes [BR:
ccap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AES38_05350
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Ortholog
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALD12430
UniProt:
A0AAE6XQ42
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All DBs
Position
1115690..1117189
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AA seq
499 aa
AA seq
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MTANPLAPSWLQPPDDANALDPRVWSRGTSRDDDGALRIAGVRAPELAARFGTPLYVVDE
VDVRGRAAETRAAFEREAAAVGTGARVYYAGKAFLSVEVARWMVEEGLHIDVCSGGELAV
ALAAGADPARLGFHGNNKSVAEIDRAVGAGIGQIVIDSAVEVERVAAAAAAHGRVQPVRL
RVNSGVHAHTHEYLATAREDQKFGITLADAPDLVARIRSHASLSFTGLHAHIGSQIFETD
AFVESARRLLDLHERLLADGAVPELNLGGGFGIAYTSVDRPVPVPEIARRLARIVGDECA
RRGIPVPVIAVEPGRSIVGPSTATLYTVGTVKDVLVTVGGVDGEVAEAESATGDVEDPRV
AAEAETAVRRYVSVDGGMSDNARPALYGADYSVRIASRASTADPALVRVAGKHCESGDLV
VLADYLPGDVRPDDLVAVPATGAYCWALASNYNWIGRPPVVAVRDGEARVIVRGETEADL
LARDLGTPLAASPDVNGAR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgaacccgctggccccgtcctggctgcagccgcccgacgacgcgaacgcgctg
gatccccgggtctggtcccgcggcacgtcccgtgacgacgacggcgccctccgcatcgcc
ggggtccgcgctcccgagctcgcggcccgcttcggcaccccgctctacgtggtcgacgag
gtcgacgtccgcggccgcgccgccgagacgcgcgccgcgttcgagcgcgaggccgccgcc
gtcggcacgggcgcgcgcgtctactacgcgggcaaggcgttcctgagcgtcgaggtcgcg
cgctggatggtggaggagggcctccacatcgacgtctgctccggcggggagctggccgtc
gcgctcgcggcgggcgcggatccggcccgcctcggcttccacggcaacaacaagtcggtc
gccgagatcgaccgcgcggtgggcgccggcatcggccagatcgtcatcgacagcgccgtc
gaggtggagcgcgtcgccgccgcggccgccgcgcacggccgtgtgcagcccgtgcgcctc
cgcgtgaacagcggcgtgcacgcccacacgcacgagtacctcgcgaccgcgcgcgaggac
cagaagttcgggatcacgctcgccgacgcgccggacctcgtcgcccgcatccgctcgcac
gcgtccctctccttcacgggcctgcacgcgcacatcggcagccagatcttcgagaccgac
gcgttcgtcgagtccgcccggcgcctcctcgacctgcacgagcggctcctcgcggacggc
gccgtccccgagctcaacctcggcggcggcttcggcatcgcctacacgtcggtcgaccgg
cccgtgcccgtgcccgagatcgcccggcgcctcgcccgcatcgtgggcgacgagtgcgcc
cggcgggggatccccgtgcccgtcatcgcggtcgagccgggccgcagcatcgtcggcccc
tccaccgccacgctctacaccgtgggcaccgtcaaggacgtgctcgtcacggtcggcggc
gtcgacggcgaggtcgccgaggccgagtccgccacgggcgacgtcgaggacccgcgcgtc
gccgcggaggcggagacggcggtccgccgctacgtgagcgtcgacggcggcatgagcgac
aacgcgcggccggccctctacggcgccgactactccgtgcggatcgcctcgcgcgcctcc
accgcggatcccgccctcgtccgcgtcgccggcaagcactgcgagagcggcgacctcgtc
gtcctcgccgactacctgccgggcgacgtgcgccccgacgacctcgtcgccgtccccgcg
accggcgcctactgctgggcgctcgcgagcaactacaactggatcggccgcccgcccgtc
gtcgccgtgcgcgacggcgaggcgcgcgtcatcgtccgcggagagaccgaggccgacctg
ctggcgcgcgacctgggcacgcccctcgccgcatcccccgacgtgaacggagcacgatga
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