Clavibacter capsici: AES38_05460
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Entry
AES38_05460 CDS
T05227
Name
(GenBank) AsnC family transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccap03000
]
AES38_05460
Transcription factors [BR:
ccap03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
AES38_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
AsnC_trans_reg_3
HTH_24
NirdL-like_HTH
HTH_20
HTH_11
Sigma70_r4
Sigma70_r4_2
DUF7343
HTH_28
NapD
HTH_5
LexA_DNA_bind
MarR_2
HTH_IclR
HTH_53
Xre-like-HTH
HTH_23
TrmB
Motif
Other DBs
NCBI-ProteinID:
ALD12449
UniProt:
A0A0M3RQU0
LinkDB
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Position
complement(1138030..1138509)
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AA seq
159 aa
AA seq
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MSTPQRPSTRGLPVDAISRSIVDQLREDGRRSYAEIGKAVGLSEAAVRQRVQKLTDAGVI
RIVALTDPQQLGLTRQAMIGVTVSGDVRVVADALAAIPAVDYVVMTAGTFDLLAEVVCED
DEELVELLNARIRALEGVVSTETFVYLKVHTQDGHGRSR
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccccagcgcccctccacccgcgggctgcccgtcgacgcgatctcccgctcc
atcgtcgaccagctgcgcgaggacggccgccggtcgtacgccgagatcggcaaggcggtc
gggctgagcgaggcggcggtccgccagcgggtgcagaagctcaccgacgccggcgtgatc
cgcatcgtggcgctcacggacccgcagcagctcgggctcacccggcaggccatgatcggc
gtcaccgtgagcggcgacgtgcgcgtggtcgcggacgccctcgcggccatccccgccgtc
gactacgtggtcatgaccgcgggcacgttcgacctcctcgcggaggtggtgtgcgaggac
gacgaggagctcgtcgagctcctcaacgcgcgcatccgggcgctggagggcgtcgtgagc
accgagacgttcgtgtacctcaaggtccacacgcaggacgggcacgggcgctcccggtga
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