Clavibacter capsici: AES38_05540
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Entry
AES38_05540 CDS
T05227
Name
(GenBank) RNA helicase
Organism
ccap
Clavibacter capsici
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
P-loop_SecA
AAA_19
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALD12463
UniProt:
A0AAE7CBQ3
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Position
complement(1154466..1155980)
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AA seq
504 aa
AA seq
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MTFTELNIDEDMVQALADHGILEPFPIQEQTIPLALSGQDIIGQAKTGTGKTFGFGLPLI
QRLGLTPEPGVQALVVVPTRELAVQVTEDLQLATANRATTVVSIYGGKAYEGQIEQLKAG
AQIVVGTPGRLLDLVGQRLLSLSDVREMVLDEADKMLDLGFLSDIEKLFAQTPAVRHTML
FSATMPGPIVALARRFMTKPIHIRATDPDEGLTQANIRHLVYRAHNMDKDEVIGRILQAE
GRGKTVIFTRTKRAAARLVEELNDRGFNAAAVHGDLNQEQRERAMAAFKAGKKDILIATD
VAARGIDVLDVTHVINHTIPEDDKAYLHRVGRTGRAGKTGIAVTFVDWDDLHKWALINRA
LEFGQPEPTETYSSSPHLFTDLDIPAGSKGRLRATPTVNPDGTPRERPGSRGSDGGRDGG
RSGGRGGDRSGGRGGERGSDRGGERTRTRTISTGSTPAEATSAIGSEQPSTAGGHDAPHA
DGQTRPRSRNRRRRSGGDRPTATS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgactttcaccgaactgaacatcgacgaggacatggtccaggcgctggccgaccacggc
atcctcgaacccttccccatccaggagcagaccatccccctggcgctctccggccaggac
atcatcggccaggccaagacgggcaccggcaagaccttcgggttcggcctcccgctcatc
cagcggctcggcctcacccccgagcccggcgtgcaggccctcgtggtcgtgccgacgcgc
gagctcgccgtccaggtcaccgaggacctccagctcgccaccgcgaaccgcgccacgacc
gtcgtgtccatctacggcggcaaggcgtacgagggccagatcgagcagctcaaggccggt
gcgcagatcgtcgtcggcaccccgggccgcctgctggacctcgtgggccagcgcctgctc
tcgctctcggacgtgcgcgagatggtgctcgacgaggccgacaagatgctcgacctcggg
ttcctctccgacatcgagaagctcttcgcgcagaccccggccgtccgccacacgatgctg
ttctcggccaccatgccgggcccgatcgtcgcgctcgcccgccgcttcatgacgaagccg
atccacatccgcgccaccgacccggacgagggcctcacgcaggcgaacatccgccacctc
gtctaccgcgcgcacaacatggacaaggacgaggtcatcggccgcatcctccaggccgag
ggccgcggcaagaccgtgatcttcacgcgcaccaagcgcgccgccgcccgcctcgtcgag
gagctcaacgaccgcggcttcaacgccgccgccgtgcacggcgacctcaaccaggagcag
cgggagcgcgccatggccgccttcaaggccggcaagaaggacatcctcatcgcgaccgac
gtggcggcgcgcggcatcgacgtgctcgacgtcacccacgtgatcaaccacaccatcccc
gaggacgacaaggcgtacctgcaccgcgtcggccgcaccggccgcgcgggcaagaccggc
atcgcggtcacgttcgtcgactgggacgacctgcacaagtgggcgctcatcaaccgcgcg
ctcgagttcgggcagccggagcccaccgagacgtactcgtcgtcgccgcacctcttcacc
gacctcgacatcccggccggctccaagggccgcctccgggcgacccccacggtcaacccc
gacggcaccccgcgcgagcgtcccggcagccgcggctccgacggcgggcgtgacggcggc
cgctcgggcgggcgtggcggcgaccgctccggcggacgcggcggcgagcgcgggagcgac
cgcggcggcgagcgcacgcgcacccggaccatcagcaccggatccaccccggccgaggcc
acctcggccatcggcagcgagcagccgagcacggccgggggccacgacgcgccgcacgcc
gacggccagacccgtccgcgctcgcgcaaccgtcgccgccgctcgggcggcgaccgcccg
accgccacgtcgtag
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