Clavibacter capsici: AES38_06075
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Entry
AES38_06075 CDS
T05227
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_06075
Enzymes [BR:
ccap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AES38_06075
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AES38_06075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ALD12541
UniProt:
A0AAE7CCK5
LinkDB
All DBs
Position
1277242..1278705
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AA seq
487 aa
AA seq
DB search
MQRTRWILADQLGDHFDDGGPVLLVESRGLLARRPYHRAKAHLILSGIRHRARALGDRVE
FHQVDHYRDVVQHRRDLQVVDPTSRGLRRLVAEIEAEVLPSRGFVTSEQEFAEWMAGRTS
DRLVMEDFYRWSRARTGILMDGDDPVGGRWNYDHDNRERPPKGAASLGLPEPWWPEEDDI
DAEVRADLDEWERKGLVRFVGEDGPRRFAVTPEEGRLALDDFVASRLNDFGPFEDASLRG
DWTMAHSLLSATMNMGVLDPADVIERIVAEHAEGRAPIQSVEGIVRQIMGWRDYVWHLYW
AFEDDYTTQNRLDAHRGVPTALRELDASGIEAACLSHVVDKVRTHGWAHHIERLMILGNL
ALQRGYDPAAMNDWFIDSFVDGTPWVMPANVVGMALHADGGRMATKPYAGGGAYIDRMSD
HCGGCPFDPKVRVGPTACPYTAGYWWFLDRNQERLRGNARMNQPLAGLRRLKDLPELVAQ
EDARRSL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcacgcgatggatcctcgccgaccagctgggcgaccacttcgacgacggcggg
cccgtgctgctcgtcgagtcgcgcggcctcctcgcgcggcgcccgtaccaccgggccaag
gcgcacctcatcctctcgggcatccggcaccgggcccgtgcgctgggggaccgcgtcgag
ttccaccaggtggaccactaccgcgacgtcgtgcagcaccggcgcgacctccaggtcgtc
gaccccacctcgcgcgggctccggcggctcgtggccgagatcgaggcggaggtgctgccg
agccgcggcttcgtcacgagcgagcaggagttcgccgagtggatggcgggccgcacgtcc
gaccgcctcgtcatggaggacttctaccggtggtcccgcgcccgcaccgggatcctcatg
gacggcgacgacccggtcggcggccgctggaactacgaccacgacaaccgcgagcgcccg
ccgaagggcgccgcgagcctcggcctgccggagccgtggtggcccgaggaggacgacatc
gacgccgaggtgcgcgcggacctcgacgagtgggagcggaagggcctcgtgcggttcgtc
ggagaggacgggccgcggcgcttcgccgtgacgccggaggagggccgcctcgcgctcgac
gacttcgtcgccagccgcctcaacgacttcggcccgttcgaggacgcgtccctccgcggc
gactggaccatggcccactcgctgctgagcgccaccatgaacatgggcgtgctggatccc
gcggacgtcatcgagcgcatcgtcgccgagcacgcggaggggcgggcgcccatccagagc
gtcgagggcatcgtgcggcagatcatgggctggcgcgactacgtctggcacctctactgg
gcgttcgaggacgactacacgacgcagaaccggctcgacgcgcaccggggtgtccccacc
gcgctgcgggagctcgacgcatcgggcatcgaggcggcgtgcctctcccacgtggtcgac
aaggtgcgcacccacgggtgggcgcaccacatcgagcggctgatgatcctcggcaacctc
gccctccagcgcggctacgacccggccgccatgaacgactggttcatcgactccttcgtc
gacggcacgccgtgggtcatgcccgcgaacgtcgtcggcatggcgctgcacgcggacggc
gggcgcatggccaccaagccctacgccggcggcggcgcctacatcgaccgcatgtcggac
cactgcgggggctgcccgttcgacccgaaggtgcgcgtggggccgacggcatgcccctac
acggcggggtactggtggttcctcgatcgcaaccaggagcggctgcgcggcaacgcccgc
atgaaccagccgctggcggggctccgccgcctcaaggacctcccggagctcgtcgcgcag
gaggacgccaggcggtcgctgtga
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