Clavibacter capsici: AES38_07955
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Entry
AES38_07955 CDS
T05227
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccap03032
]
AES38_07955
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_07955
Enzymes [BR:
ccap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AES38_07955
DNA replication proteins [BR:
ccap03032
]
Prokaryotic type
DNA Topoisomerases
AES38_07955
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AES38_07955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
ALD12856
LinkDB
All DBs
Position
complement(1690217..1692763)
Genome browser
AA seq
848 aa
AA seq
DB search
MSPSTTNTTPDEPAERIEDVDVSTEMENSFLEYAYSVIYSRALPDARDGLKPVQRRILYQ
MSEMGLRPDRGHVKSARVTGEVMGKLHPHGDSAIYDAMVRMAQPFTLRVPLIDGHGNFGS
LDDGPAAPRYTEARLAASALATVEGLDEDVVDFVPNYDNAFMQPAVLPAAFPNLLVNGAS
GIAVGMATNMVPHNLIEVVGAARHLIDHPDATLDDLMAFVPGPDLPTGGTIIGLSGVKDA
YLTGRGSFKTRARVSVESLTPRKSGLVVTELPYLVGPEKVIEKIKDGVQNKKLSGITNVT
DLTDRTHGLRLVIEIKTGFNPEAVLEQLYRYTPLEDGFSINNVALVDGSPQTLGLKELLQ
VYVAHRLDVVTRRTRYRLARKQERLHLVLGLLIAILDIDEVIQVIRGSDDTEQARARLME
VFDLSTLQADYILELRLRRLTRFSRIELEEERDRLQAEIAELEAILADPRRLRALVSSEL
QEVADRFGTPRRTLLTEAAPSVAGASSRRSAPVLEIADVPCRVLLSTTGRAVRVDLPTDA
PGTPLQTVRRSSHDAVLTAIETTSRTRIGAITSTGRLITMTPVDLPVVPVASVQLGAGVR
IRDYLGLTDRKERVVALVALGTEEAIALGTRQGVVKRVAPSSLPAKPEFEVIALKKGDEV
VGARQGAETDELVFVTSEAQLLHFPAVSVRPQGIQAGGVAGVNLGAGARVLFFSSVAPEG
AEVVTISASSATITGVDPGRAKVSAFGDFPRKGRATGGVRAHAYLKGEDHLALAWVGPGP
ALAVGPAGEVRQLPPTGMKRDGSGIPLEKAIGGVGQAVTPADAPDAASGAAVGVVESPAE
DGSAPLET
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagtccctccaccacgaacaccacgcccgacgagcccgccgagcggatcgaggacgtc
gacgtctccaccgagatggagaactcgttcctcgagtacgcctactcggtcatctactcc
cgcgccctgcccgacgcccgcgacggcctcaagcccgtgcagcgccggatcctctaccag
atgagcgagatgggcctgcgtcccgaccgcggccacgtgaagagcgcgcgcgtcacgggc
gaggtgatgggcaagctccacccgcacggcgactccgccatctacgacgccatggtccgc
atggcgcagccgttcaccctgcgcgtgccgctcatcgacgggcacggcaacttcgggtcg
ctcgacgacggaccggcagcgccccgctacacggaggcgcggctcgccgcgtccgcgctc
gcgacggtcgagggcctcgacgaggacgtcgtcgacttcgtgcccaactacgacaacgcc
ttcatgcagccggccgtgctgccggctgccttcccgaacctcctcgtcaacggcgcgagc
ggcatcgcggtcggcatggcgacgaacatggtcccccacaacctcatcgaggtcgtgggc
gccgcgcgtcacctcatcgaccaccccgacgccacgctcgacgacctgatggcgttcgtg
ccggggccggacctgccgacgggcggcacgatcatcggcctgtcgggcgtcaaggacgcc
tacctcacgggccgcggcagcttcaagacccgggcgcgcgtctccgtcgagagcctcacg
ccgcggaagtcggggctcgtggtcaccgagctgccgtacctcgtggggccggagaaggtc
atcgagaagatcaaggacggcgtccagaacaagaagctgtccgggatcacgaacgtcacg
gacctcacggaccgcacgcacgggctccggctcgtcatcgagatcaagacgggcttcaat
cccgaggcggtgctcgagcagctgtaccgctacaccccgctggaggacggcttcagcatc
aacaacgtggcgctcgtcgacggcagcccgcagacgctcgggctcaaggagctgctgcag
gtctacgtggcccaccggctcgacgtcgtcacccgccgcacgcgctaccggctcgcgcgc
aagcaggagcggctgcacctcgtgctcggcctcctcatcgcgatcctcgacatcgacgag
gtcatccaggtcatccgcggcagcgacgacacggagcaggcgcgcgcccgcctcatggag
gtgttcgacctctcgacgctgcaggccgactacatcctggagctgcgtctccgtcggctc
acgcggttcagccgcatcgagctggaggaggagcgcgatcggctgcaggccgagatcgcg
gagctcgaggcgatcctcgccgacccccgccgactccgtgccctcgtctcgagcgagctg
caggaggtcgccgaccgcttcggcacgccgcggcgcacgctgctcaccgaggccgcgccg
agcgtcgcgggggcgtcgagcaggcgctccgcgcccgtgctggagatcgccgacgtgccg
tgccgcgtgctgctgtccaccacgggccgcgcggtccgcgtcgacctgccgacggacgcg
ccgggcacgcccctgcagaccgtccgccgcagctcgcacgacgcggtcctcacggccatc
gagaccacgagccgcacccgcatcggcgcgatcaccagcaccggccgcctcatcaccatg
acgcccgtcgacctgccggtcgtcccggtcgcgagcgtgcagctgggtgccggcgtgcgg
atccgcgactacctcgggctgacggacaggaaggagcgcgtggtggcgctcgtggcgctc
ggcaccgaggaggccatcgccctcggcacgcgccagggcgtcgtgaagcgcgtcgccccg
tcgtcgctgcccgcgaagcccgagttcgaggtcatcgcgctcaagaagggcgacgaggtc
gtcggcgcacgccagggcgcggagacggacgagctcgtcttcgtcacgagcgaggcgcag
ctgctgcacttccccgccgtctccgtgcggccccaggggatccaggcgggcggcgtcgcc
ggcgtcaacctcggcgcgggcgcgcgcgtcctcttcttctcctccgtcgcgccggagggt
gccgaggtcgtcacgatctccgcgtcgtcggcgaccatcacgggcgtggaccccggccgc
gccaaggtgtccgcgttcggcgacttcccgcgcaagggccgcgccaccggcggcgtccgg
gcgcacgcgtacctcaagggcgaggaccacctcgccctcgcctgggtcggtcccggcccg
gcgctggccgtcggccccgcgggcgaggtgcgccagctcccgcccacgggcatgaagcgc
gacggatccggcatcccgctcgagaaggccatcggcggcgtcggccaggcggtcacgccg
gcggatgcgcccgacgccgcgtccggcgccgcagtcggcgtggtcgagtcccctgccgag
gacggctcggcgccgctcgagacgtag
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