Clavibacter capsici: AES38_08620
Help
Entry
AES38_08620 CDS
T05227
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ccap
Clavibacter capsici
Pathway
ccap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AES38_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccap03021
]
AES38_08620
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_08620
Enzymes [BR:
ccap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AES38_08620
Transcription machinery [BR:
ccap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AES38_08620
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AES38_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ALD12973
UniProt:
A0A0M4HR00
LinkDB
All DBs
Position
complement(1838428..1838697)
Genome browser
AA seq
89 aa
AA seq
DB search
MVDKTQGIIDPPIDELLSKVDSKYALVIFASKRARQINDYYADLHEGSLFDNVGPLVDST
IDDKPLSVAMHEINEDKLVATPIVEPAAS
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atggttgacaagacccagggcatcatcgacccgcccatcgacgagctcctctcgaaggtc
gactcgaagtacgcgctcgtgatcttcgcctccaagcgggcccgtcagatcaacgactac
tacgccgacctgcacgagggcagcctgttcgacaacgtcggaccgctcgtcgactccacc
atcgacgacaagcccctctcggtcgccatgcacgagatcaacgaggacaagctcgtcgcc
acgcccatcgtggagcccgcggcctcctag
DBGET
integrated database retrieval system
