Clavibacter capsici: AES38_09000
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Entry
AES38_09000 CDS
T05227
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccap
Clavibacter capsici
Pathway
ccap03030
DNA replication
ccap03430
Mismatch repair
ccap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AES38_09000
03430 Mismatch repair
AES38_09000
03440 Homologous recombination
AES38_09000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccap03032
]
AES38_09000
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_09000
Enzymes [BR:
ccap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AES38_09000
DNA replication proteins [BR:
ccap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AES38_09000
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AES38_09000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
HROB
Motif
Other DBs
NCBI-ProteinID:
ALD14200
LinkDB
All DBs
Position
complement(1912400..1915861)
Genome browser
AA seq
1153 aa
AA seq
DB search
MLDGAARVGPLVQAAAEQQMPAVAITDHGNVFGAYDFWKQAKSAGVKPIIGTEAYITPGT
HRGDRTRVRWGDGGRDDVSGSGAYTHLTMLAETTEGMHNLFRLSSRASLEGYYFKPRMDR
ELLSTYAKGLIATTGCPSGEVQTRLRLGQYDEAVKAASDYRDIFGAGNYFCEIMDHGLGI
ERRIMSDLLRLAKDLDLPLVATNDLHYTHEHDATSHAALLCVQSGTTLDDPNRFKFDADE
FYLKTAQQMRHLFRDHEEACDNTLLIAERCDVQFNESANYMPRYPVPEGESEQTWFVKEV
ERGLVRRYPRGFSDDVRKRADYEVGVIAQMGFPGYFLVVADFIGWSKENGIRVGPGRGSG
AGSMVAYAMGITDLDPLEHGLLFERFLNPDRVSMPDFDVDFDDRRRGEVIRYVTDKYGDE
RVAQIVTYGTIKAKQALKDSSRVLGYPFSMGDKLTKAMPPAIMGKDIPLSGILDTDHPRY
REAGDFREVLAMDPEAQKVFETAQGIENLKRQWGVHAAGVIMSSEPLIDIIPIMKREQDG
QIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALNNIESNRGEKLVLEDLGLDDQGAYDL
LARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVIALYRPGPMGANSHTNYALRKNGLQ
EITPIHPELEEPLREVLGTTHGLIVYQEQVMSVAQKLAGFTLAQADLLRRAMGKKKKSEL
DKQFAGFSQGMIDNGYSMAAVKALWDILLPFSDYAFNKAHSAAYGVVSYWTAYLKAHYPA
EYMAALLTSVGDSKDKMALYLNECRRMGIKVLPPDVNESIGFFAAAGADIRFGLGAVRNV
GANVVEALRGARTEQGAFESFDDFLKKVPLPVANKRTVESLIKAGAFDSLGDTRRALLEV
HEGMIDASVSDKRAAMNGQVGFDFDSLWDEPQHARKVPERPEWAKRDKLAFEREMLGLYV
SDHPLAGLEIPLAKLASTGIAELLATDASMDGETVTLAGLLTSVQHRTARNSGNQYGMVQ
LEDFGGEITCMFMGKAYQEFAPALQSDTVVVIRGRVSTRDDGMNIHAFSMFQPDLGQSLG
SGPLLISLAENRATTETVMGLNDVLIRHSGDTEVRLQLVKGDNGRVFEIPYPVTVSADLY
GELKSLLGPNCLG
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggagcggcccgcgtcggcccgctcgtgcaggccgccgccgagcagcagatg
cccgccgtggcgatcaccgaccacgggaacgtgttcggcgcgtacgacttctggaagcag
gcgaagtccgcgggcgtgaagcccatcatcggcaccgaggcctacatcacgccgggcacg
catcgcggggatcgcacgcgcgtgcgctggggggacggcggccgggacgacgtctccgga
tccggcgcctacacgcacctgacgatgctcgccgagaccacggagggcatgcacaacctc
ttccggctgtcgtcgcgggcctcgctcgagggctactacttcaagccccgcatggaccgc
gagctcctcagcacctacgcgaaggggctcatcgccaccaccggctgcccgtcgggcgag
gtgcagacgcggctccgcctcgggcagtacgacgaggccgtgaaggccgcgagcgactac
cgcgacatcttcggggcgggcaactacttctgcgagatcatggaccacggcctcggcatc
gagcgccggatcatgagcgacctcctccgcctcgccaaggacctcgacctcccgctcgtc
gccacgaacgacctgcactacacgcacgagcacgacgcgacgagccacgcggcgctcctc
tgcgtgcagtcgggcaccaccctcgacgacccgaaccggttcaagttcgacgccgacgag
ttctacctcaagaccgcgcagcagatgcgccacctcttccgcgaccacgaggaggcgtgc
gacaacaccctcctcatcgccgagcggtgcgacgtgcagttcaacgagtccgcgaactac
atgccgcgctaccccgtgcccgagggcgagagcgagcagacctggttcgtcaaggaggtg
gagcgcggcctggtccggcgctacccccggggcttctccgacgacgtgcgcaagcgcgcc
gactacgaggtcggcgtcatcgcgcagatgggcttcccgggctacttcctcgtcgtcgcc
gacttcatcggctggtcgaaggagaacgggatccgggtgggccccggccgcggatccggt
gccggctcgatggtcgcgtacgcgatgggcatcaccgacctcgacccgctggagcacggc
ctcctgttcgagcggttcctcaaccccgaccgcgtctccatgcccgacttcgacgtcgac
ttcgacgaccgtcgccgcggcgaggtcatccggtacgtgaccgacaagtacggcgacgag
cgcgtggcgcagatcgtcacctacggcaccatcaaggccaagcaggcgctcaaggactcc
agccgcgtgctgggctaccccttctccatgggcgacaagctgacgaaggccatgccgccc
gcgatcatgggcaaggacatcccgctgtccggcatcctcgacaccgaccacccgcgctac
cgcgaggcgggcgacttccgcgaggtgctcgcgatggaccccgaggcgcagaaggtcttc
gagaccgcgcagggcatcgagaacctcaagcgccagtggggcgtgcacgcggccggcgtc
atcatgtcgagcgagccgctcatcgacatcatcccgatcatgaagcgggagcaggacggc
cagatcgtcacgcagttcgactaccccgcgtgcgagtccctcggcctcatcaagatggac
ttcctggggctgcgcaacctcacgatcatcgacgacgcgctcaacaacatcgagtcgaac
cgcggcgagaagctggtgctcgaggacctcggcctcgacgaccagggcgcgtacgacctg
ctcgcccgcggcgacacgctcggcgtcttccagctcgacggcgggcccatgcgctcgctc
ctgcgcatgatgaagccggacaacttcgaggacatctcggccgtcatcgcgctctaccgt
cccggccccatgggcgccaactcgcacacgaactacgcgctgcggaagaacgggctgcag
gagatcacgccgatccacccggagctcgaggagccgctgcgcgaggtgctcggcaccacg
cacggcctcatcgtgtaccaggagcaggtcatgtcggtcgcccagaagctcgcgggcttc
actctcgcgcaggccgacctcctccgccgcgcgatgggcaagaagaagaagtccgagctc
gacaagcagttcgccggcttctcacagggcatgatcgacaacggctactcgatggccgcg
gtgaaggcgctctgggacatcctgctgccgttctccgactacgcgttcaacaaggcgcac
tcggcggcgtacggcgtcgtctcgtactggaccgcgtacctcaaggcccactacccggcc
gagtacatggcggcgctcctcacgagcgtcggcgactcgaaggacaagatggcgctctac
ctcaacgagtgccgccgcatgggcatcaaggtgctgccgcccgacgtcaacgagtccatc
gggttcttcgccgccgccggcgccgacatccgcttcggcctgggcgcggtccggaacgtc
ggcgcgaacgtcgtcgaggcgctccgcggggcgcgcaccgagcagggcgcgttcgagtcc
ttcgacgacttcctcaagaaggtcccgctgcccgtcgccaacaagcgcacggtcgagtcg
ctcatcaaggccggcgcgttcgactcgctgggggacacccggcgggcgctgctcgaggtg
cacgagggcatgatcgacgcctccgtcagcgacaagcgcgccgccatgaacggccaggtc
ggcttcgacttcgacagcctgtgggacgagccgcagcacgcgcgcaaggtgcccgagcgg
cccgagtgggcgaagcgcgacaagctcgccttcgagcgcgagatgctcggcctctacgtc
tccgaccacccgctcgccgggctcgagatcccgctggcgaagctcgcgtccaccggcatc
gccgagctgctggcgaccgacgcgtcgatggacggcgagacggtcacgctcgcggggctc
ctcacgagcgtgcagcaccgcaccgcgcggaactcgggcaaccagtacggcatggtgcag
ctcgaggacttcggcggcgagatcacctgcatgttcatgggcaaggcgtaccaggagttc
gcgccggcgctgcagagcgacaccgtcgtggtgatccggggacgcgtgtccacgcgcgac
gacggcatgaacatccacgcgttctcgatgttccagcccgacctcgggcagagcctcggc
tccgggccgctgctcatcagcctcgcggagaaccgcgccacgaccgagaccgtcatgggc
ctgaacgacgtcctgatccgccactcgggcgacaccgaggtgcggctgcagctcgtgaag
ggcgacaacgggcgcgtcttcgagatcccgtacccggtcacggtgagcgcggacctctac
ggcgagctgaagtcgctgctcgggccgaactgcctgggctga
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