Clavibacter capsici: AES38_09610
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Entry
AES38_09610 CDS
T05227
Name
(GenBank) MFS transporter
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccap03009
]
AES38_09610
Enzymes [BR:
ccap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AES38_09610
Ribosome biogenesis [BR:
ccap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AES38_09610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ALD13139
UniProt:
A0A0M3RR76
LinkDB
All DBs
Position
complement(2039840..2040700)
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AA seq
286 aa
AA seq
DB search
MTPSSDRPHAGNPDEPVAGVRLQKVMAAAGVASRRVCEDMIAAGRVTVNGEVVTEPGRRI
DPDVDEVAVDDRAVQLDTSKRYLMLNKPVGIYSSLRDERGRPDLREFTDEFEERLFNVGR
LDAETSGLLILTNDGDLAHVLAHPSFGVLKTYIAKVTGRVTPQTIQRLTQGVDLEDGPIQ
ADRARILSGGGDQTLVEITLHSGRNRIVRRMLDEVGHPVEELVRRQFGPLHLGSLGVGRV
RDLTSDELGQLLTISREARAQAGPATPQGAGAAADAQGDVDREDGE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaccccctcctctgatcgcccgcacgccgggaaccccgacgagcccgtcgccggcgtc
cgcctgcagaaggtgatggccgccgccggcgtcgccagccgccgcgtctgcgaggacatg
atcgccgcgggccgcgtcaccgtgaacggcgaggtcgtcaccgagcccggccgccgcatc
gaccccgacgtggacgaggtcgcggtcgacgaccgcgccgtgcagctcgacacctccaag
cgctacctcatgctgaacaagcccgtcgggatctactcgtccctgcgcgacgagcgaggc
cgccccgacctccgcgagttcacggacgagttcgaggagcgcctgttcaacgtcggccgc
ctcgacgcggagacgagcgggctgctgatcctcaccaacgacggcgacctggcgcacgtg
ctcgcgcacccgtcgttcggggtgctcaagacgtacatcgcgaaggtcacgggccgcgtc
acgccgcagacgatccagcgcctcacgcagggcgtcgacctcgaggacgggccgatccag
gcggatcgtgcgcgcatcctctcgggcggcggcgaccagacgctcgtggagatcaccctg
cactcgggccgcaaccgcatcgtgcgccgcatgctcgacgaggtcggccacccggtggag
gagctcgtgcgccgccagttcgggccgctgcacctcggatccctgggcgtcggccgcgtg
cgcgacctcacctcggacgagctcggccagctcctcaccatctcgcgcgaggcccgcgcg
caggccggacccgcgaccccgcagggcgccggcgccgccgccgacgcgcagggggacgtc
gaccgcgaggacggcgagtga
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