Clavibacter capsici: AES38_10475
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Entry
AES38_10475 CDS
T05227
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccap03016
]
AES38_10475
Enzymes [BR:
ccap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AES38_10475
Transfer RNA biogenesis [BR:
ccap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AES38_10475
Prokaryotic type
AES38_10475
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALD13291
UniProt:
A0AAE7CC93
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All DBs
Position
complement(2224536..2225495)
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AA seq
319 aa
AA seq
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MDTPTPRAAPSTASGLLLIDKRGEWTSHDLVARTRRLAGTRKVGHAGTLDPMATGLMILG
VNSSTRLLTYLVGLDKEYLATIRLGRATTTDDREGEVVSRAEPGRIRDLAVADVERAIAD
LRGTISQVPSAVSAIKVDGKRAYARVRAGEEVELAAREVTVSAFDVLRFDAVEAEEGEED
GAQLDLSVRITCSSGTYVRALARDLGRALGVGGHLTALRRTRVGPFHVDDAVAIDDLVVA
DRLVPPADAAARLFEVLHLTEQEAVDLGHGKRLTTPDEAPTEDPLAAVAPDGRLVGLVGF
RGRTGTSLVNFPADEAGAS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggataccccgaccccccgcgccgcgccctccaccgcgagcggcctgctcctcatcgac
aagcgcggggagtggaccagccacgacctcgtcgcccgcacgcgccgcctcgccggcacc
cgcaaggtcgggcacgcgggcacgctcgacccgatggcgacgggcctcatgatcctcggc
gtcaacagctcgacgcgcctgctcacctacctcgtcggcctcgacaaggagtacctcgcg
acgatccgcctcggccgcgccaccaccacggacgaccgagagggcgaggtcgtctcgcgc
gccgagcccgggcggatccgcgacctcgccgtcgccgacgtggaacgcgccatcgcggac
ctccgcggcaccatctcgcaggtgccgagcgccgtcagcgccatcaaggtcgacggcaag
cgcgcgtacgcccgcgtccgcgccggcgaggaggtcgagctcgccgcgcgcgaggtcacc
gtctcggccttcgacgtgctccgcttcgacgccgtggaggcggaggagggcgaggaggac
ggcgcccagctcgacctctccgtgcggatcacgtgctcgtcgggcacctacgtgcgggcc
ctcgcgcgggacctcggccgcgcgctcggcgtcggcggccacctcacggcgctccgccgc
acgcgcgtcggcccgttccacgtcgacgacgccgtggcgatcgacgacctcgtggtcgcc
gaccggctcgtgccgccggccgacgccgccgcccgcctcttcgaggtgctgcacctcacc
gagcaggaggccgtcgacctcgggcacggcaagaggctgacgacgcccgacgaggcgccc
accgaggatccgctcgccgccgtcgcacccgacggccggctcgtgggcctggtcggcttc
cgcgggcgcacgggcacctccctcgtcaacttcccggccgacgaggcgggcgcctcgtga
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