Clavibacter capsici: AES38_10505
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Entry
AES38_10505 CDS
T05227
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccap03021
]
AES38_10505
03009 Ribosome biogenesis [BR:
ccap03009
]
AES38_10505
Transcription machinery [BR:
ccap03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AES38_10505
Ribosome biogenesis [BR:
ccap03009
]
Prokaryotic type
rRNA transcription factors
AES38_10505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_2
S1
KH_NusA_C
KH_1
Motif
Other DBs
NCBI-ProteinID:
ALD13296
UniProt:
A0AAE6XRQ7
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All DBs
Position
complement(2232080..2233087)
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AA seq
335 aa
AA seq
DB search
MDIDLSVLRMMEREREIPFEELVSIIEQAILTAYLKHTDQADAKPVADGVPPARVHLDRK
SGHVSVHVPELDEDGLVIGEAEDSPSDFGRIAAFAAKQVINQRLRDIGDDRILGEFKGRE
GDIVAGVIQQGPNPRMIHVDLGTIEAILPPEEQVPGERYVHGSRLRVYVTSVSRGAKGPQ
ITVSRTHPSLVRKLFALEVPEIAQGLVEIVSLAREAGHRTKIAVRATEPGINAKGACIGE
LGQRVRAVTAELNEEKIDIVDYSESLPVFVGNALSPARVTSSFVIDQATKAVRALVPDYQ
LSLAIGKEGQNARLAAKLTGAKIDIQPDSILEGDD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgacctcagcgtcctgcgcatgatggagcgcgagcgcgagatcccgttcgag
gagctcgtctcgatcatcgagcaggccatcctcaccgcctacctcaagcacaccgaccag
gccgacgccaagcccgtcgccgacggcgtgccgcccgcccgcgtgcacctggaccgcaag
tccgggcacgtctccgtccacgtccccgagctcgacgaggacggcctcgtcatcggcgag
gccgaggacagcccgagcgacttcggccgcatcgccgccttcgccgccaagcaggtcatc
aaccagcgcctgcgcgacatcggcgacgaccgcatcctcggcgagttcaagggccgcgag
ggcgacatcgtcgcgggcgtcatccagcagggcccgaacccccgcatgatccacgtcgac
ctcggcaccatcgaggcgatcctgccgcccgaggagcaggtgcccggcgagaggtacgtg
cacggctcgcgcctgcgcgtctacgtcacgagcgtctcccgcggcgcgaagggcccgcag
atcacggtctcgcgcacgcacccctcgctcgtccgcaagctgttcgcgctcgaggtgccg
gagatcgcccagggcctggtggagatcgtgtcgctggcccgcgaggccggccaccgcacc
aagatcgcggtgcgcgcgaccgagcccggcatcaacgccaagggcgcctgcatcggcgag
ctggggcagcgcgtccgcgcggtcacggccgagctcaacgaggagaagatcgacatcgtc
gactactccgagtcgctgcccgtgttcgtcggcaacgcgctctcgcccgcccgggtcacg
agctcgttcgtcatcgaccaggcgaccaaggccgtgcgcgcgctcgtgcccgactaccag
ctgtcgctcgcgatcggcaaggagggccagaacgcccggctcgccgccaagctcacgggc
gcgaagatcgacatccagcccgactcgatcctcgagggcgacgactga
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