Clavibacter capsici: AES38_10595
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Entry
AES38_10595 CDS
T05227
Name
(GenBank) RTX toxin
KO
K20276
large repetitive protein
Organism
ccap
Clavibacter capsici
Pathway
ccap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AES38_10595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
Motif
Other DBs
NCBI-ProteinID:
ALD13312
LinkDB
All DBs
Position
complement(2257974..2263958)
Genome browser
AA seq
1994 aa
AA seq
DB search
MIRDWIRRHRQAATTVTGGAVVLALLTGFALVSDGYDAQRVDLDDGSVWVVNSAQQAIGR
ANTSVLELDSVVDSRSEDIDVLQGGSTVLLADRGASRLDVVDDATSEVVDTAPLPAGAEV
MLAGSRAAILVPATGQLWLVPVAGLAAFDAASAPTLALGADAVASMDDDGTLLVYSADAG
TLSRIRAATDDTVEETVDVGPVGAPTEEQAEAAADPAAAVAGETVAAGDPGRPAGQRLAL
TGVDGHWALYDADARALLVDGRAVDLAGSVAADARVALQRASADGRGVLVAHTGGLLEVP
VAGGDPVVVTADVRGDPARPVRVAGCEHAGWADGSGWQRCLAPATLPDEVAGDARRTDRG
AVSGLGAMPAQAALRFLVDGARVVLNDVRGGAAWAVQRGDGRIDNWSDLIDRDRSDTVVE
QNTADTPPEADRVQQPPVAVDDDLGARPGRTTALPVLLNDHDPNGDVLVIDSVTPVDAEV
GAVDIVDEGQGLQLALRPQASGTVRLSYVVSDGRGGTATADVRVAVRTADENAPPVQARP
ATGTVAEGDRLQADVLGGWYDPDGDPMYLTRASVALPDVVSWKPEGRVVYADAGAGGDTR
TVALHVSDGREEGSGELVVTVRRAGDVPLVAEGFVVQAAVGREVTVEPLAHARGGSGAIR
LAAVPARAGVQITPDLEAGTFRLQGGQVGTHLLEYTVTDGRATATGVVRVEVRGAPESDG
RPVTVPHTVFVRELQATDVDVLATDFDPAGGVLVITDAASPGDAVGVRAEVVQQRLVRIS
LTRPLDGPVDVGYRVSNGVAEAEGVITVIEVPEPAVRQPPVATDDRVAVRVGDAVDVPVL
ANDEQPDGDALRLDPVLVDPLPEGAGLLFASDDRLRYLAPDRTGDYTAVYRAVAPDGQWA
TATLTISVREADVATNAAPVPRPLTARVLAGETVRIPVPLTGIDPDGDSVRLLGQDTGPE
KGQVTEVGPDWIDYQAGDYSTGTDAFGYAVVDGLGARANGTVRVGISPRVEGARNPVATA
DTVTVRPGRVLRVQVLANDTDPDGGALELVSVQPQAAGVVAGLDGDTVRVVAPDQAGRYG
FVYGVRNQRGGTDEAFLTVIVDPAAPPTRPVARDTVLQLSDVLDRTSVDVDVMRNVFSAE
GDVSALVVSVGAGYEDVARVTPDGRIRVEVGDARRIVPFTVAQPDDPAISATAFIWVPGF
EDTLPQLRVGQPRPTVASGERLVLDLDDHVVAAGGRSVRIADPNALSATHADGPVELVDE
DAIAYRSEPGYFGPAAISFTVTDADGDGGRTAALVLPVTVTPTENQPPVFTGAVIDLEPG
QSKDIDLGRLTTYPYADDRGQLAFAVDGAVAAGFRATVDGGTLRISADEGVPTGTAASFP
VRVRDATQTGRAGRVDLRVVPSTRPLAQPATDEGSVTRGSTTSIDVLANDQAGNPFPGTP
LTVASIRGADGASLPAGVTVTPSADRATLAVSASADAEPGDVRVQYEVRDATGDAGRAAF
GTVVIHVQDRPGPVTALRATGFADRSLTVAFEPGVANGSAVTGYRVRVLRGGTATATVTC
PSTTCTVPTPGNGPTDAVQVEVRAVNGVGESDPVAISGLWSDVLPAAPAGLATQPLADGL
RVSWQPSAVPSSSSPVTQYVVTVGGITRQVAADATSVEVRDPSLVAEVPVAVSVAARNGA
QVQDATAWLAASVVGTPRGAPTATGAPSAVADPADETRVTVSWPAFSGPGVDGIRYLVAA
HAPGSAPGCSVATEGVTPWSADHGPAVDVGGATSHVFTGLASDQPVAFTVLAANSQGCTV
VGAGELTPRTAPSTPVVTVDPPRGDRPSDDGVFRARLADARYRPGSASASATLLYRVDGQ
GDGVPVGVGQALTLPRPGAAASIQVRVVEDSGDGRPRSSGWSDPVTAGTAVDARAGDVRF
ATDASGGATVSWTSTPPAGSGYARTERRCGGQGAWTDASSGAAGSCAIPAGVERILEVRV
TANSGTLYTYAHRG
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgactggatccgccgccaccgccaggccgcgacgaccgtcacgggcggggcc
gtcgtgctcgccctcctcacgggcttcgccctcgtctccgacggctacgacgcgcagcgc
gtcgacctcgacgacggctcggtgtgggtcgtcaactccgcgcagcaggcgatcggccgc
gccaacacgtccgtgctcgagctcgacagcgtcgtcgactcccgcagcgaggacatcgac
gtgctgcaggggggatccaccgtgctgctcgccgaccgcggcgcctcccgcctcgacgtg
gtggacgacgcgacgagcgaggtggtcgacacggcgccgctgcccgcgggcgccgaggtc
atgctcgccgggtcgcgcgccgcgatcctcgtgcccgccaccggccagctctggctcgtg
ccggtggccgggctcgccgcgttcgacgccgcgagcgcaccgaccctcgcgctcggcgcg
gacgcggtcgcgtcgatggacgacgacggcacgctcctcgtgtactccgccgacgcgggc
acgctctcgcgcatccgcgccgcgaccgacgacacggtcgaggagaccgtggacgtcggg
ccggtgggcgcgcccacggaggagcaggcggaggccgcggccgacccggcggcggccgtc
gcgggcgagaccgtcgcggcgggggatcccggccggccggccgggcagcgcctcgcgctc
acgggcgtcgacgggcactgggcgctgtacgacgccgacgcgcgcgccctcctcgtcgac
gggcgcgcggtcgacctcgccggatccgtcgccgccgacgcgcgcgtcgccctgcagcgc
gcgtcggcggacggccgcggcgtgctcgtcgcgcacacgggcgggctcctggaggtgccg
gtcgcgggcggggatcccgtggtcgtcaccgcggacgtccggggcgaccccgcgcgtccg
gtccgcgtcgccggctgcgagcacgcgggctgggcggacggatccggctggcagcgctgc
ctcgcccccgcgacgctccccgacgaggtcgcgggcgacgcgcggcgcaccgaccgcggg
gccgtgagcggcctcggcgcgatgccggcgcaggcggccctccgcttcctggtcgacggc
gcgcgcgtggtgctgaacgacgtgcgcggcggggcggcgtgggccgtgcagcgcggcgac
ggccgcatcgacaactggtcggacctcatcgaccgcgaccgctccgacaccgtcgtcgag
cagaacacggccgacaccccgcccgaggccgatcgcgtgcagcagccgcccgtcgcggtg
gacgacgacctcggcgcgcgccccggccgcaccaccgcgctgcccgtgctcctcaacgac
cacgacccgaacggcgacgtgctcgtcatcgactccgtcacgcccgtcgacgcggaggtc
ggcgcggtcgacatcgtggacgagggccagggcctccagctcgcgctccggccgcaggcg
tccgggacggtgcgcctctcctacgtcgtgagcgacggccgcggcggcacggcgacggcc
gacgtgcgcgtggccgtgcgcaccgccgacgagaacgcgccgcccgtccaggcgcggccc
gcaacgggcacggtggccgagggcgaccggctccaggccgacgtgctgggcggctggtac
gaccccgacggggatccgatgtacctcacgcgcgcgagcgtcgccctgccggacgtcgtc
agctggaagcccgagggccgcgtggtctacgcggacgcgggggccggcggcgacacgcgc
acggtcgcgctccatgtgtccgacgggcgcgaggagggatccggcgagctggtcgtcacc
gtgcgccgggccggcgacgtgccgctcgtggccgagggcttcgtcgtgcaggctgcggtc
gggcgcgaggtgacggtggagccgctcgcgcacgcgcgcggcgggagcggcgcgatccgg
ctggcggccgtgcccgcgcgggccggagtgcagatcacgcccgacctcgaggccggcacc
ttccgcctccagggcggccaggtgggcacgcacctcctcgagtacacggtgaccgacggg
cgcgcgaccgcgacgggcgtcgttcgggtcgaggtgcgcggcgcgcccgagtccgacggc
cggcccgtgaccgtgccgcacaccgtgttcgtgcgcgagctccaggcgaccgacgtggac
gtgctcgccaccgacttcgaccccgcgggcggcgtgctcgtgatcaccgacgcggcctcc
ccgggcgacgccgtgggcgtgcgggcggaggtcgtgcagcagcggctggtgcggatcagc
ctgacccggccgctcgacgggccggtggacgtgggctaccgggtgagcaacggcgtggcc
gaggccgagggcgtcatcaccgtgatcgaggtgcccgagcccgccgtgcgccaaccgccc
gtcgcgaccgacgaccgggtggcggtgcgcgtgggcgacgcggtcgacgtccccgtgctc
gccaacgacgagcagcccgacggcgacgcgctgcgcctcgaccccgtgctggtggacccg
ctgcccgagggcgccggcctcctcttcgcgagcgacgaccgcctgcgctacctcgcgccc
gaccgcacgggcgactacacggccgtctaccgcgccgtcgcgcccgacggccagtgggcg
accgcgaccctcaccatctcggtgcgcgaggccgacgtcgcgaccaacgcggcgcccgtg
ccgcgcccgctcaccgcgcgggtgctcgcgggcgagaccgtgcggatccccgtgccgctc
accggcatcgaccccgacggcgactccgtgcgcctcctcgggcaggacaccgggcccgag
aagggccaggtcaccgaggtcgggccggactggatcgactaccaggcgggcgactactcc
accggcaccgacgcgttcggctacgcggtcgtcgacgggctgggcgcgcgggcgaacggc
acggtgcgcgtggggatcagcccgcgcgtcgagggcgcgcgcaaccccgtcgccaccgcg
gacaccgtgaccgtgcggcccggccgggtgctgcgcgtgcaggtgctcgccaacgacacg
gacccggacggcggcgccctcgagctcgtctccgtgcagccgcaggccgccggcgtcgtc
gcggggctcgacggcgacaccgtgcgcgtcgtcgcgcccgaccaggccggccgctacggc
ttcgtctacggcgtgcggaaccagcgcggcggcaccgacgaggcgttcctcacggtcatc
gtggatccggccgcgccgcccacccggcccgtcgcgcgcgacaccgtgctccagctctcg
gacgtgctcgaccgcacgagcgtcgacgtcgacgtgatgcgcaacgtcttctccgcggag
ggcgacgtctccgcgctcgtggtgagcgtgggcgcgggctacgaggacgtggcgcgcgtg
acccccgacgggcggatccgcgtggaggtcggcgacgcgcgccgcatcgtccccttcacc
gtggcgcagcccgacgatcccgccatctccgcgaccgcgttcatctgggtgcccggcttc
gaggacacgctgccgcagctgcgcgtcggccagccgcggcccaccgtcgcgagcggggag
cggctcgtgctcgacctcgacgaccacgtggtcgcggccggcgggcgctcggtgcggatc
gccgaccccaacgcgctctccgcgacgcacgccgacggcccggtcgagctcgtggacgag
gacgccatcgcgtaccgcagcgagcccgggtacttcgggcccgcggcgatctccttcacg
gtgacggacgcggacggcgacggcgggcgcacggccgcgctcgtgctgcccgtcaccgtc
acgcccaccgagaaccagccgcccgtgttcacgggcgccgtcatcgacctcgagcccggg
cagtccaaggacatcgacctcggccgcctcaccacctacccgtacgccgacgaccgcggc
cagctcgcgttcgcggtggacggggccgtcgccgccgggttccgcgcgacggtcgacggc
ggcacgctgcggatctccgcggacgagggcgtgccgacgggcaccgcggcctcgttcccc
gtccgcgtccgcgacgcgacgcagacgggccgcgcgggccgagtggacctccgggtcgtg
ccgtcgacccgcccgctcgcgcagcccgcgacggacgagggcagcgtcacccgcggatcc
accacgagcatcgacgtgctcgcgaacgaccaggccggcaacccgttcccgggcacgccg
ctcacggtcgcctccatccgcggcgcggacggcgcgagcctccccgcgggcgtgaccgtg
accccgtccgccgaccgcgccacgctcgcggtcagcgcgtccgccgacgcggagcccggc
gacgtgcgcgtgcagtacgaggtgcgcgacgccacgggcgacgcgggccgggccgcgttc
ggcaccgtcgtgatccacgtgcaggaccgcccggggcccgtcacggccctgcgcgccacc
ggcttcgccgaccgctcgctgacggtcgcgttcgagccgggcgtcgccaacgggtccgcg
gtcaccggctatcgggtgcgcgtgctccgcggcggcacggcgaccgccaccgtgacctgc
ccgtcgacgacctgcaccgtgcccaccccgggcaacgggccgacggacgccgtgcaggtg
gaggtgcgggccgtcaacggcgtgggggagtcggaccccgtcgcgatctccggcctctgg
tccgacgtgctccccgcggcgcccgccggcctcgccacccagccgctcgcggacggcctc
cgcgtctcgtggcagccgtccgccgtgccgtcgtcgtcgagtcccgtcacccagtacgtc
gtgacggtcggcggcatcacccggcaggtcgccgccgacgccacgagcgtcgaggtgcgg
gatccgtcgctcgtcgccgaggtgcccgtcgccgtgagcgtggccgcgcgcaacggcgcc
caggtgcaggacgcgaccgcgtggctcgcggcgtccgtcgtcggcacgccccgcggcgcc
ccgaccgcgaccggcgcgccctccgcggtcgccgacccggcggacgagacgcgcgtcacc
gtgtcgtggccggcgttctccggcccgggcgtcgacgggatccgctacctcgtcgccgcg
cacgcccccgggtccgcgcccggctgctcggtcgccaccgagggcgtgacgccgtggtcg
gccgaccacgggcccgcggtcgacgtgggcggtgcgaccagccacgtgttcacgggcctc
gcgagcgaccagcccgtcgcgttcaccgtgctcgccgccaacagccaggggtgcacggtc
gtcggcgcgggtgagctcacgccgcgcaccgcgccctccacgcccgtcgtcacggtcgac
ccgccgcgcggcgaccgcccgtccgacgacggcgtcttccgggcgcggctcgccgacgcg
cgctaccggccgggcagcgcctccgcgtcggcgacgctgctgtaccgcgtcgacggccag
ggcgacggcgtgccggtcggcgtcggccaggcgctcacgctgccgcgcccgggcgccgcg
gcgtcgatccaggtgcgcgtcgtcgaggactcgggcgacgggcgcccgcgctcgagcggc
tggtcggatcccgtgaccgccggcaccgccgtggacgcgcgcgccggcgacgtgcggttc
gcgaccgacgcgtcgggcggcgcgaccgtctcctggacctccacgccgcccgccggcagc
ggctacgcccgcaccgagcggcgctgcggcggccagggcgcgtggaccgacgcgtcctcg
ggcgccgccggatcctgcgcgatcccggcgggcgtcgagcggatcctcgaggtgcgcgtc
accgcgaactcgggcaccctgtacacgtacgcccaccgcggatga
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