Clavibacter capsici: AES38_11355
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Entry
AES38_11355 CDS
T05227
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccap03009
]
AES38_11355
Ribosome biogenesis [BR:
ccap03009
]
Prokaryotic type
ribosomal protein modification factors
AES38_11355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
ALD13439
UniProt:
A0AAE6XR09
LinkDB
All DBs
Position
complement(2422788..2424518)
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AA seq
576 aa
AA seq
DB search
MIGIAHATSPAPAGDVGSWTAPSTLVVGSPGADGTADMAELWSRARPAEQADMVRHPDAQ
RVGGAEVGAVLGSVVRAVADFAVGSGAEGRALWEVDQRSGLTRRAVFDRARDDGASGGRG
SSSRTGVLDPTSLRERSLDGWEWEGEGLIDPAAGRLGPAVTDAVEWTTLAPASGATSVQG
HRGARRLTWSGQDASFAASRRSAVVEGIERLVGGHQARGGSSTAPAASLGGRAITPLDFD
LYPEAAYGVLVERFDARSPHEWVAGTSLVDGGTVMVPRESVYYAQRPEGPRWSLGTSSGC
ATGSTVEEATVFGLLELVERDTFVNAWYGGIPPVPVVPSTVPGTADMLARVELLGWSTEL
AALPDEWGIPVFVAAVVASGVRAFGAAAHPDAATAARRALTEAVAYAPDRVREVAARSAR
VRELRDDPLLVRDLEDHPLLAVPGAHPAYAAVCGDRRDARPLDEVAGEVARGRRPMVPDP
RGSADDRAGVPAGEVVEALVGALARTGVETFRVVQTAPFQERLGLTTVMTLAPALSQLDF
GWDAQRVRTSSRPERQARLLAPSAATRRRDLPHPFS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggcatcgcgcacgccacgtcgcccgcgcccgcgggcgacgtgggctcctggacc
gcgccgtcgaccctcgtggtggggtcgccgggcgccgacggcaccgcggacatggcggag
ctgtggtcccgggcgcggcccgcggagcaggcggacatggtccggcaccccgacgcgcag
cgcgtggggggagccgaggtgggcgcggtcctgggatccgtcgtccgggcggtcgcggac
ttcgccgtcggatcgggcgcggagggccgggcgctctgggaggtggaccagcggtccggc
ttgacccgcagggccgtgttcgaccgcgcacgcgacgacggggcatccggaggccgagga
tcgtcgtcacggaccggggtcctcgaccccacgtcgcttcgcgagcgctcgctcgacggg
tgggagtgggagggggaggggctcatcgaccccgccgcggggcgcctcggtcccgcggtc
accgacgccgtcgagtggacgaccctggcgcccgcctccggcgcgacctccgtgcagggg
catcgcggagcccggcgcctgacctggtcggggcaggatgcgtcgttcgcggcctcgcga
cgatccgccgtcgtggaggggatcgaacggctcgtcggcggacaccaggcgcggggaggg
tcgtccaccgcaccggcggcgtccttgggcggccgcgccatcaccccgctcgacttcgac
ctctacccggaggccgcctacggggtcctcgtggagcgcttcgacgcgcgctccccgcac
gagtgggtcgcgggcacctcgctcgtggacggggggaccgtgatggtcccgcgtgagtcg
gtctactacgcgcagaggccggaggggccgcgctggagcctcggcacgtcctcggggtgc
gccacgggatcgaccgtcgaggaggccaccgtgttcgggctgctcgagctcgtcgagcgg
gacacgttcgtcaacgcctggtacggagggatcccgcccgtgcccgtcgtgccctcgacg
gtcccggggacggccgacatgctcgcacgcgtcgagctcctcggctggtcgaccgagctg
gccgcgctgcccgacgagtggggcatcccggtgttcgtggccgcggtcgtcgcgtccggc
gtgcgcgccttcggcgccgcggcccaccccgacgccgcgaccgcggcccgtcgtgcgctc
accgaggccgtcgcctacgccccggatcgggtgcgcgaggtggccgcgaggagcgcgcgc
gtgcgggagctccgggacgacccgctcctcgtgcgcgacctcgaggaccacccgttgctg
gcggtccccggggcgcatccggcgtacgcggccgtgtgcggcgaccggcgggatgcgcgg
cccctcgacgaggtggcgggagaggtcgcgcgaggacggaggcccatggtgccggatccg
cgcgggtccgccgacgaccgcgccggcgtcccggccggcgaggtcgtcgaggccctcgtc
ggggcgctcgcgcggaccggcgtggagaccttccgcgtcgtgcagaccgccccgttccag
gagcggctcgggctgacgacggtcatgacgctggcgcccgccctctcccagctcgacttc
ggctgggacgcccagcgcgtgcgcacctcctcgcgtcccgagcgccaggcccggctcctc
gccccgtccgctgcgactcggcgccgcgacctgccgcacccgttctcatga
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