Clavibacter capsici: AES38_11920
Help
Entry
AES38_11920 CDS
T05227
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ccap
Clavibacter capsici
Pathway
ccap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AES38_11920
09124 Replication and repair
03420 Nucleotide excision repair
AES38_11920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccap03021
]
AES38_11920
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_11920
Enzymes [BR:
ccap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AES38_11920
Transcription machinery [BR:
ccap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AES38_11920
DNA repair and recombination proteins [BR:
ccap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AES38_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALD13528
UniProt:
A0A0M4HTQ3
LinkDB
All DBs
Position
2544611..2546251
Genome browser
AA seq
546 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVAHADAEDARHDLAVFAELERAPEHIHTYRITRLGLWNARAAG
HTAADMLATLERYSRFPVPQSVTADVTDTVGRYGRLVIGRDDEGELRISSTESAVLSEVA
SSRRIAPLLTERVDASTYRVQAWARGQLKQELVKIGWPAEDLAGYTPGTPHDMDLTQDGW
TLRDYQADAVEHFLDGGSGVVVLPCGAGKTLVGAAAMARAKTTTLILVTNTVSARQWRTE
LLKRTTLTEDEIGEYSGQSREVKPVTIATYQILTAKRKGEYAHLALLDALDWGLVVYDEV
HLLPAPVFKLTADLQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISP
AECFEVRIDLPDDERLVYAAAADDERYRLAATAPAKLDVTRALVERHRGESILVIGQYLE
QIDELSEALGAPKLTGATPVAERERLYQAFRDGTERVLVVSKVANFSVDLPDATVAIQVS
GSFGSRQEEAQRLGRLLRPEASGLSASFYTLVSRDTVDQDFAQNRQRFLAEQGYAYTILD
AAGIAA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggccccctcatcgtccagagcgaccgcaccgtcctcctcgaggtggcccac
gcggacgccgaggacgcccggcacgacctcgccgtcttcgccgagctggagcgggcgccg
gagcacatccacacgtaccggatcacccggctcggcctctggaacgcgcgggccgccggc
cacacggccgcggacatgctggcgacgctcgagcgctactcccgcttccccgtcccgcag
tccgtcacggcggacgtcaccgacaccgtgggccgctacggccgcctcgtcatcggacgc
gacgacgagggcgagctgcggatctcgagcaccgagtccgccgtcctctccgaggtcgcg
agctcgcgccgcatcgcacccctgctgaccgagcgcgtcgacgcctccacgtaccgggtg
caggcgtgggcgcgcggccagctcaagcaggagctggtgaagatcggatggcccgccgag
gacctcgccggctacaccccgggcacgccgcacgacatggacctcacgcaggacggctgg
accctgcgcgactaccaggcggacgcggtcgagcacttcctcgacggcggatccggcgtg
gtcgtcctcccctgcggcgccggcaagacgctcgtcggcgccgccgcgatggcgcgcgcc
aagacgacgacgctgatcctcgtgaccaacacggtctccgcccgccagtggcgcaccgag
ctgctgaagcgcaccacgctcacggaggacgagatcggcgagtactcgggccagtcccgg
gaggtcaagcccgtcaccatcgcgacctaccagatcctcacggccaagaggaagggcgag
tacgcccacctggcgctcctcgacgcgctcgactggggcctcgtcgtctacgacgaggta
cacctgctgcccgctccggtcttcaagctgacggccgacctgcaggcccgccgccgcctc
ggcctcaccgccacgctcgtgcgggaggacggccgcgagggcgacgtcttcagcctcatc
gggccgaagcggttcgacgcgccgtggaaggagatcgaggcccagggcttcatctccccc
gcggagtgcttcgaggtgcgcatcgacctgcccgacgacgagcgcctcgtctacgccgcc
gctgccgacgacgagcgctaccgcctcgccgcgaccgcgcccgcgaagctcgacgtgacg
cgcgcgctggtcgaacggcaccgcggcgagagcatcctcgtgatcggccagtacctggag
cagatcgacgagctctccgaggcgctgggcgccccgaagctcacgggcgccacgcccgtc
gccgagcgcgagcggctgtaccaggcgttccgcgacggcacggagcgcgtgctcgtggtg
agcaaggtcgcgaacttctcggtcgacctgccggacgcgaccgtcgcgatccaggtgtcc
ggctcgttcgggtcgcgccaggaggaggcccagcgcctcggccgcctgctccgcccggag
gcgtccggcctgtcggcgagcttctacacgctcgtctcccgcgacaccgtcgaccaggac
ttcgcgcagaaccgccagcggttcctcgccgagcaggggtacgcgtacacgatcctcgac
gccgccggcatcgccgcctga
DBGET
integrated database retrieval system
