Clavibacter capsici: AES38_12320
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Entry
AES38_12320 CDS
T05227
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccap
Clavibacter capsici
Pathway
ccap03420
Nucleotide excision repair
ccap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AES38_12320
03430 Mismatch repair
AES38_12320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_12320
Enzymes [BR:
ccap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AES38_12320
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AES38_12320
MMR (mismatch excision repair)
Other MMR factors
AES38_12320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
AAA_11
ResIII
PPS_PS
Motif
Other DBs
NCBI-ProteinID:
ALD13592
UniProt:
A0AAE6XT14
LinkDB
All DBs
Position
complement(2637248..2639698)
Genome browser
AA seq
816 aa
AA seq
DB search
MSADPAAVPPSSTPIILDGHGGSGGGTGTPADPLLEGLNPEQREAVVYRGPALLIVAGAG
SGKTRVLTHRIASLIESREAWPSQILAITFTNKAAAEMRERVESLLGQASEGMWISTFHS
ACVRILRREAEAFGFTQNFTIYDSADSRVLIKRIIKQLDADTLGFTVSSVSGRISKLKNE
LSDADTFARTANFNDPAEAMFVEIFRQYTRSLAAANAFDFDDLIGQTVFLFRAFPKVAAL
YQRRFRHVLVDEYQDTNHAQYSLIRELTRAVAPDDVPVDTRMSTNGMGGIDGASLTVVGD
SDQSIYAFRGADIRNITEFERDFPQSKVVLLEQNYRSTQNILTAANAVISNNFDRKDKKL
WTSIGDGDKIVGFTGYSGHDEAQFVADEIQKLHEEGTAYSEIAVFYRTNAQTRALEEILI
RSAVPYRIMGGTKFYERAEIKDAMAYLIAVANPADVLALRRILNTPKRGIGPATETALAN
FAEAHGVTFREAMRRASELGLGPKVTQAILTLSRMLDEVALLLDPDRPEGRTSVGDLVTT
LLERSGLVQALRASKDAQDEARAENVEELVAVTKEFSRNNPEGQLVDFLTEVSLVAAADE
LDDSSGTVSLMTLHTAKGLEYDSVFLTGVEEDLLPHRMSANEPGGPAEERRLFYVGITRA
RRRLFISLAMTRAQFGEVNVAMPSRYLQEIPAELIDWKQSPGMATSRGGTQPRALNARRE
GGGYGGRSRSTSGFEDPALPPPPRPKTQWANTVTGQVRDNGDLELAFGDRIRHTDFGDGR
VTAVTGEGRKRIAEVQFDGPAGRKRLLIKIAPIEKL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaccccgccgccgttcccccctccagcacgccgatcatcctcgacgggcac
gggggctccgggggagggaccgggaccccggcggatccgctgctcgagggcctcaacccg
gagcagcgcgaggccgtcgtctaccgcgggcccgccctcctcatcgtcgccggcgccggg
tccggcaagacgcgcgtgctcacccaccgcatcgcgagcctcatcgagtcccgggaggca
tggccgagccagatcctcgccatcaccttcacgaacaaggccgcggcggagatgcgggag
cgcgtcgagtccctcctcgggcaggcatccgagggcatgtggatctcgaccttccactcc
gcgtgcgtgcgcatcctgcgccgcgaggccgaggcattcggcttcacgcagaacttcacc
atctacgactcggccgacagccgcgtgctcatcaagcggatcatcaagcagctcgacgcc
gacacgctcggcttcacggtctcctccgtctccggccgcatctccaagctcaagaacgag
ctctccgacgcggacacgttcgcgcgcacggccaacttcaacgaccccgccgaggcgatg
ttcgtggagatattccggcagtacacccggtcgctcgcggcggcgaacgcgttcgacttc
gacgacctcatcggccagaccgtcttcctcttccgcgcgttcccgaaggtggcggcgctc
taccagcggcgcttccgccacgtgctcgtggacgagtaccaggacaccaaccacgcgcag
tactcgctcatccgcgagctgacccgtgcggtcgccccggacgacgtgcccgtcgacacg
cgcatgtccacgaacggcatgggcggtatcgacggcgcctcgctcacggtggtcggcgac
agcgaccagtcgatctacgccttccggggcgccgacatccgcaacatcaccgagttcgag
cgcgacttcccgcagtcgaaggtcgtgctcctcgagcagaactaccggtcgacgcagaac
atcctcaccgccgccaacgccgtgatctcgaacaacttcgaccgcaaggacaagaagctg
tggacctcgatcggggacggcgacaagatcgtcggcttcacggggtactcgggtcacgac
gaggcgcagttcgtggccgacgagatccagaagctgcacgaggagggcaccgcctactcc
gagatcgccgtcttctaccgcacgaacgcgcagacgcgcgcgctcgaggagatcctcatc
cgctcggccgtgccgtaccggatcatgggcggcaccaagttctacgagcgggctgagatc
aaggacgcgatggcgtacctgatcgccgtggcgaaccccgccgacgtgctcgcgctccgc
cgcatcctcaacaccccgaagcgcggcatcggcccggccacggagacggccctggcgaac
ttcgccgaggcgcatggcgtcaccttccgcgaggccatgcgccgcgcatcggagctcggg
ctcgggcccaaggtgacccaggcgatcctcacgctgtcccgcatgctcgacgaggtggcg
ctgctgctcgaccccgaccggccggaggggcgcacctccgtgggcgacctcgtgaccacg
ctgctggagaggagcggcctcgtccaggcgctgcgggcgagcaaggacgcgcaggacgag
gcacgcgcggagaacgtcgaggagctcgtcgccgtgacgaaggagttctcgcggaacaac
cccgagggtcagctggtcgacttcctcaccgaggtgtccctcgtcgccgcagcggacgag
ctcgacgactcgagcggcacggtctccttgatgacgctgcacacggcgaaggggctcgag
tacgactcggtgttcctcacgggagtggaggaggacctcctcccgcaccgcatgtccgcc
aacgagccgggcggcccggccgaggagcgccggctgttctacgtcgggatcactcgcgca
cgacggcgcctcttcatctccctcgcgatgacgcgtgcgcagttcggcgaggtgaacgtg
gccatgcccagccggtacctgcaggagatccccgccgagctcatcgactggaagcagtcg
cccggcatggcgacctcccgcggaggcactcaaccgcgcgccctcaacgctcggcgggaa
ggcggcggatacggcggccggtcgcgatccacgagcggattcgaggacccggcactgccg
ccgcccccgcgtccgaagacccagtgggccaacacggtcaccgggcaggtacgcgacaac
ggcgacctggagctcgcgttcggcgatcggatccgccacaccgacttcggcgacggccgc
gtcaccgccgtcacgggtgaggggcggaagcgcatcgccgaggtgcagttcgacggaccg
gcgggcaggaagcgactgctcatcaagatcgcgcccatcgagaagctctag
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