Clavibacter capsici: AES38_12815
Help
Entry
AES38_12815 CDS
T05227
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03090
RNA polymerase sigma-B factor
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccap03021
]
AES38_12815
Transcription machinery [BR:
ccap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AES38_12815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
KORA
HTH_23
MarR_2
HTH_Crp_2
HTH_38
MarR
HTH_3
Sigma70_ECF
YdaS_toxin
DUF7343
UPF0122
HTH_37
HTH_15
Motif
Other DBs
NCBI-ProteinID:
ALD14286
LinkDB
All DBs
Position
2735159..2735968
Genome browser
AA seq
269 aa
AA seq
DB search
MRAAAATEDPTGEAERRRLHDQIVLDHLELADQLARQHSGRAHDWSDLRQVGYLGLVKAA
RRYDPGFGAPFVSFAIPTISGEIKRHLRDNGWVIRPPRQVQELRHALLAVVPALTQRLGR
TPTDAELAAHTGHTRDEVAEALAAHTSLRPASLDFTVHEEEGTSLAETLGDDDPGYARAE
RTVLLDAARGILSDRDRRILHLRFVDECSQSEIAAELGVTQMQVSRLLARILGALRAELT
RGEPEALPEAAPLAAVSPIRARVADRRSA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcggccgccgcgaccgaggatccgacgggcgaggccgagcgccgccgcctgcac
gaccagatcgtgctcgaccacctcgagctcgccgaccagctcgcgcgccagcactccggc
cgcgcccacgactggagcgacctgcgccaggtcggctacctcggcctggtcaaggccgcg
cgccgctacgacccgggcttcggcgcgcccttcgtgtcgttcgcgatccccaccatctcc
ggcgagatcaagcgccacctgcgcgacaacggctgggtgatccgcccgccgcggcaggtg
caggagctgcggcacgcgctgctggccgtcgtgcccgcgctcacgcagcggctcggccgc
acgcccaccgacgccgagctcgcggcccacaccgggcacacgcgcgacgaggtggccgag
gcgctcgccgcgcacaccagcctccggcccgcctcgctcgacttcacggtgcacgaggag
gaggggacctcgctcgccgagaccctcggcgacgacgaccccggctacgcgcgcgccgag
cgcaccgtgctgctggacgcggcccgcgggatcctcagcgaccgcgaccggcgcatcctc
cacctgcgcttcgtcgacgagtgcagccagagcgagatcgcggccgagctcggcgtgacg
cagatgcaggtgtcgcggctgctcgcgcggatcctcggggcgttgcgcgcagagctcacg
cgcggcgagcccgaggcgctgccggaggccgcgccgctcgccgcggtgtcgccgatccgc
gcgcgcgtggcggaccggcgctcggcctga
DBGET
integrated database retrieval system
