Clavibacter capsici: AES38_13470
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Entry
AES38_13470 CDS
T05227
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccap03009
]
AES38_13470
Ribosome biogenesis [BR:
ccap03009
]
Prokaryotic type
ribosomal protein modification factors
AES38_13470
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
ALD14300
UniProt:
A0AAE7CDK2
LinkDB
All DBs
Position
complement(2862429..2863691)
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AA seq
420 aa
AA seq
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MSRGGPGVVSPYTGLVEHAHPMAFTPDAIPDALYSGRSADTGFLTGTDSERFSMGPGGSR
MEARRSCIGEAVERMSLAGAPGGFRAPLGADVRQVAPEAFQRFHPTQLDDPSFHYERARQ
GDLLTWMPARSLHRGEAVHVPAQMVVFDDPHRADGHREPHVEPATSSGVAAGPHFGFAAG
RAVLELIERDAFQRAWLRGSTPPAFDWRASPRLTAATLRELERLEELCGRYEASFTVRVL
DAAADVPVLLAVMRSDRIGVAVGCAADFRLDRAVLNAVREALHTHNWCLRLLAEPMIEPA
DVVEFEDHIRLHCRPSARPLTAALDASDERVAAVGGPASWGEVVQGLDREGIDVLLADIT
APEVRAAGFHVVRALSPDLVALDVVHAARFLGHPRLYRLWRDGPALAGPEDLVPTPHPFP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcggcggcccgggcgtcgtcagcccgtacacggggctcgtggagcacgcgcac
cccatggcgttcacgcccgacgccatcccggacgcgctctactcggggcgctcggcggac
acggggttcctcaccggcacggactccgagcgcttcagcatggggccgggcggctcgcgg
atggaggcccgccgctcctgcatcggcgaggcggtcgagcgcatgtccctggcgggcgcg
cccggcggcttccgcgcacccctcggtgccgacgtccgccaggtggcgccggaggccttc
cagcgcttccacccgacgcagctcgacgatccgtccttccactacgagcgcgcccggcag
ggcgacctcctcacgtggatgccggcccgctcgctgcaccggggcgaggcggtgcacgtg
cccgcgcagatggtggtgttcgacgacccgcatcgggcggacgggcaccgcgagccgcac
gtggagccggcgacctcgtcgggggtcgcggcggggccgcacttcgggttcgccgccggg
cgcgcggtgctcgagctcatcgagcgggacgcgttccagcgcgcgtggctccgcggatcc
acgcccccggccttcgactggcgcgccagcccgcggctgaccgccgcgaccctccgcgag
ctcgagcgcctggaggagctgtgcggccggtacgaggcgtcgttcaccgtgcgcgtgctc
gacgccgcggccgacgtgcccgtgctgctcgcggtcatgcggagcgaccggatcggggtc
gcggtcggctgcgcggccgacttccggctcgaccgggccgtcctcaacgcggtccgcgag
gcgctgcacacgcacaactggtgcctgcggctgctggccgagccgatgatcgagccggcg
gacgtggtcgagttcgaggaccacatccggctgcactgccgcccgtcggcgcgcccgctc
acggctgcgctcgacgcctcggacgagcgggtcgcggccgtcggcggcccggccagctgg
ggggaggtggtccaggggctcgaccgcgaggggatcgacgtgctgctcgccgacatcacc
gcgcccgaggtgcgcgccgccggcttccacgtggtgcgcgcgctgagcccggacctcgtg
gcgctcgacgtggtgcacgccgcgcggttcctcgggcacccgcgcctgtaccggctctgg
cgcgacgggcccgcgctcgccgggccggaggacctcgtccccaccccgcacccgttcccg
tga
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