Campylobacter californiensis: CCAL_0094
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Entry
CCAL_0094 CDS
T10527
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ccaq Campylobacter californiensis
Pathway
ccaq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCAL_0094 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaq03400
]
CCAL_0094 (nfo)
Enzymes [BR:
ccaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CCAL_0094 (nfo)
DNA repair and recombination proteins [BR:
ccaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CCAL_0094 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
CFAP58_CC
Motif
Other DBs
NCBI-ProteinID:
QCD50031
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All DBs
Position
91434..92288
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AA seq
284 aa
AA seq
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MRYIGAHVSSSGGVENAPLNAAKIGANAFALFVKNQRQWSAKPLEDKSIKAFKQNCIDAG
ILPKHILPHDSYLINLGHFDDTKREQSFNAFMDEIERVEQLGLELLNFHPGSHLKEISEN
ECLSLIAECMNEAIRRSKNVKLVIENTAGQGSNLGYKFEHLAFLIERINDKSRVGVCLDT
CHTFAAGYDLRTPEAYKKTMDEFDNIVGYDFLSAMHLNDSKFDLACKKDRHESLGKGFLG
MSAFDNIINDERIEDIPLILETIDESIWKDEIEILRNLQKDRNV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagatatatcggagcgcatgtcagcagtagcggaggagttgaaaatgcgcctttaaat
gcagcaaagatcggtgcaaacgcttttgcactttttgttaaaaatcagcgccaatggagt
gcaaaaccacttgaagacaaaagcataaaagcctttaagcaaaattgtatcgacgccgga
attttacccaagcacatcctacctcacgatagctaccttataaatttaggtcattttgat
gatacaaaaagagagcagagttttaatgccttcatggacgagatcgaacgtgtcgagcaa
cttggccttgagcttttaaattttcatccaggctctcatctaaaagagataagtgaaaac
gagtgcttaagtcttatcgcagagtgtatgaatgaggctataagacgcagtaaaaatgtc
aaacttgtcatagaaaacaccgccggtcagggttcaaatttgggttataaatttgaacat
ttggcgtttttgatagagcgtataaatgataaaagcagggttggggtttgtcttgatacc
tgtcacacatttgccgcaggctatgatctaagaacgcccgaggcatataaaaaaacaatg
gatgagtttgataatatcgttggatatgattttttatcagccatgcatttaaacgactct
aaatttgaccttgcgtgcaaaaaagaccgccatgaaagccttggaaagggctttttaggc
atgagcgcttttgataatatcataaatgatgagcgcatagaggatattccgcttattctt
gaaactattgatgagagtatttggaaagacgagatagaaattttaagaaatttacaaaag
gatagaaatgtttaa
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