Campylobacter californiensis: CCAL_0698
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Entry
CCAL_0698 CDS
T10527
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ccaq Campylobacter californiensis
Pathway
ccaq02040
Flagellar assembly
Brite
Transcription machinery [BR:
ccaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCAL_0698 (rpoD)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QCD50614
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Position
complement(678173..680032)
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AA seq
619 aa
AA seq
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MSTSKDAFNQIEELFVENAKGFVTYEKLVKLLEKAPTATVVKKIEALANANKVQLMTAAE
VAKARNIADAKKRQKESEKEQNSNELNLEEEFDLANDNDFLEWSRSDSPVRMYLREMGQI
ALLTKEEEIEISKKIELGEDIIIDAFCSVPFLIDFILDYKEPLINRERRVKELFKSFEDD
GESENENEEEESDEEENEDEETPKKSLKNDKRAEKVIESFKALEKAKKEWLKTANKQEKV
ENEDTASKLTLAFKKKILKDKLMDLGPTSKLISEIVKSMETALKSDDEFDRELKRLEYRL
PMFSDELKKNHKSILKDIVKLSKEEIATRVPEATMVSTYVEIKKLFQTKEASKQGFDLNP
TVLKEILEQIKRGKKISDEAKARMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKA
VDKFEYRKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKINRKYLQEEG
KEPDVSIIAKEVGLSIDKVKQVIKITKEPISLEAPIANEDDGKFGDFVEDKTSLSPMEQI
LKGDLREQIDEVLSQLNDREKAVICMRFGLLEDESDRTLEEIGKALNVTRERVRQIESSA
IKKLKHPKVGRKLKNYIEG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaagcaaagacgcgtttaatcaaatcgaggaactttttgttgagaacgcaaag
ggttttgttacttatgaaaaattagtaaaactacttgaaaaagccccaacggcaacagtg
gttaaaaagatagaagcattggctaacgcaaacaaagttcagcttatgactgccgcagag
gttgcaaaagcaagaaatatagcagatgctaaaaaacgccaaaaagagagcgaaaaagag
caaaattcaaatgaattaaatttagaagaagaatttgaccttgcaaacgataacgacttt
ttagaatggtcacgctcagatagtccagtaaggatgtatctacgcgaaatggggcaaata
gcgcttttaacaaaagaagaagagatagaaatcagcaaaaaaatcgaacttggcgaagat
attatcatagatgcattttgctcggtgccatttcttatagactttatacttgattacaaa
gagccgcttatcaaccgtgaacgtcgcgtaaaagagctttttaaaagctttgaagatgat
ggtgaaagtgaaaatgaaaacgaggaagaagagagcgatgaggaggaaaatgaggatgaa
gaaactcctaaaaaatcactcaaaaacgacaaacgcgctgaaaaagttatagaaagcttt
aaagcacttgaaaaagccaaaaaagagtggctaaaaacagccaataaacaagaaaaagtt
gagaacgaagatactgcgtcaaaacttactcttgcatttaaaaagaaaattctaaaagat
aagcttatggatctaggaccaacaagcaagcttataagcgagatcgtaaaatcaatggaa
actgcgctaaaaagcgacgacgaatttgatagagaacttaaacgccttgagtatcgcttg
ccaatgtttagtgacgaacttaagaaaaatcacaaaagcatactaaaagacatagtaaaa
ctatcaaaagaagagatagctacacgtgttcctgaagcaacaatggtttcaacttatgtt
gagataaagaaattgtttcaaacaaaagaggctagcaagcaaggatttgaccttaatcca
accgtcttaaaagaaattttagagcagataaaacgcggaaagaaaatttcagacgaggca
aaagccagaatggcaaaatcaaatttacgccttgtcgttagtatagcaaaacgctacacc
aaccgtggcttgccgtttttagatcttatccaagagggaaatatcggcttaatgaaagct
gttgataaatttgaataccgaaaaggctacaaattctcaacttacgcaacatggtggata
cgtcaagccatatctcgcgcgatcgccgatcaagcaagaactatccgcataccgatacac
atgatagaaacgatcaatcgtatcaataaaatcaaccgaaaatacctccaagaagaaggg
aaagagcccgatgtaagcatcattgcaaaagaggtcggactaagcatagacaaggtaaaa
caagtcatcaaaatcacaaaagagcctattagcttagaagctccgatagcaaacgaagat
gatggaaaatttggagactttgtcgaggataaaacatcattaagcccaatggagcagata
ttaaaaggcgaccttagagagcagatagacgaggttctctctcagctaaacgaccgtgaa
aaagctgttatttgcatgagatttggtctacttgaagacgaaagtgatagaacactagaa
gagataggcaaggctcttaatgtaactcgtgagcgtgttcgtcagatagaaagctcagcc
attaaaaagctaaaacaccctaaagtgggtagaaaactcaaaaactacatcgagggataa
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