Campylobacter californiensis: CCAL_1176
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Entry
CCAL_1176 CDS
T10527
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccaq Campylobacter californiensis
Brite
KEGG Orthology (KO) [BR:
ccaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaq03016
]
CCAL_1176 (truB)
Enzymes [BR:
ccaq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCAL_1176 (truB)
Transfer RNA biogenesis [BR:
ccaq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCAL_1176 (truB)
Prokaryotic type
CCAL_1176 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QCD51077
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All DBs
Position
1161937..1162758
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AA seq
273 aa
AA seq
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MNAIFVADKPTGLSSNQFLSRLKRKYKVKKAGYSGTLDPFASGALIVAFGSYTRLFRFLN
KSPKVYEATMWIGASSKSLDNQNITQVQKILPFAPSSLEIVRQDLLGEVEFIPPKYSAKN
INGERAYNLAKKGIEFELKKQTMQVFSCEILHYMHPFLTFRISLSEGGYVRSYAELFAKK
LGFDATLTALRRISEGKFKFENEKFLNPTEILDIKGNEYLGDISDLLDGKELNVGKLKFK
ENGIYLLNYDKFFSIIEVQNDMVNYCLNKVEKC
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaatatttgtcgccgataaaccaaccggactaagctcgaatcaatttcttagc
cgcttaaaacgaaaatacaaggttaaaaaggctggctactccggcacgcttgatccattt
gcaagtggcgctttaatcgttgcatttggctcgtatacacgtttgttcaggtttttaaat
aagtccccaaaagtatatgaagcaacaatgtggataggggcaagtagcaaaagtctggat
aatcaaaacataacgcaggtgcaaaaaattttaccttttgcaccaagctcgcttgagata
gtgcgtcaagatttattaggagaggttgaatttatccccccaaaatatagcgctaaaaac
ataaacggtgagcgcgcgtataatcttgcaaaaaaaggtatagaattcgagctaaaaaaa
cagacgatgcaggtttttagctgtgaaattttacactacatgcatccgtttttgacattt
agaatttcacttagcgaaggtggatatgtgcgctcttacgcggagctttttgcaaaaaaa
ctaggctttgatgcaacattaacggcacttagacggattagcgaaggtaaatttaaattt
gaaaacgaaaaatttctaaatccaactgaaattttagacataaaaggcaacgaatatcta
ggcgacataagcgacctgcttgacggcaaagagcttaatgtaggcaagctaaaatttaaa
gaaaatgggatatatttactaaattatgataaattttttagtattatcgaagtgcaaaac
gatatggttaattattgtttaaacaaggttgaaaaatgttaa
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