Campylobacter californiensis: CCAL_1229
Help
Entry
CCAL_1229 CDS
T10527
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ccaq Campylobacter californiensis
Brite
KEGG Orthology (KO) [BR:
ccaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaq03009
]
CCAL_1229
Enzymes [BR:
ccaq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CCAL_1229
Ribosome biogenesis [BR:
ccaq03009
]
Prokaryotic type
ribosomal protein modification factors
CCAL_1229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
DUF7189
Motif
Other DBs
NCBI-ProteinID:
QCD51129
LinkDB
All DBs
Position
complement(1207864..1209171)
Genome browser
AA seq
435 aa
AA seq
DB search
MSKLHLISLGCNKNLVDSEIMLGRLRNFELTNEISDADVIIVNTCGFIASAKEESVRTIL
EMAEAKKQGATLVVTGCLMQRYREELMRELPEVDLFTGVGDYDKIDEIILKKQNLFSPDV
YLQSNEERIITGSNYHAYIKIAEGCNQKCSFCAIPTFKGKLKSRSLENIIDEVKRLVQKG
YYDFSFLSQDSSSWMRDNGVSDGLISLIDEVEKINGVKSARILYLYPSTTTMALIDRIVA
SPVFHNYFDMPIQHISDKMLRVMKRGSNEAKVREILSAMRSTPNSFLRTGVIVGHPGESD
EDFDSLCKFLEEFKFDRISAFAYSREEDTAAFDMEQIPTKIISKRLSKIEKVIKKTLDDS
FRLQIGREIIASIEGESSEGEMFFGGKMDVWDKDIDGEILINESDERELEVGARYLCEVT
DSVDNKLIARVIKRA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacttcatcttatatctcttggctgtaataaaaatttagttgattctgaaata
atgcttggtcgtcttcgcaacttcgagctaacaaatgaaatttcagatgcagacgtgata
atcgtaaatacatgcggttttatcgcttcggcaaaagaggagagtgtacgcactatactt
gagatggcagaggctaaaaaacaaggcgcaacacttgttgtaaccggctgtttgatgcaa
agataccgcgaagagcttatgcgtgaactacctgaggtagatctttttacgggcgtgggt
gactatgacaagatcgatgaaataatcttaaaaaagcaaaatttatttagcccggacgtg
tatctacaaagcaacgaagaacgtattataactggttcaaactatcatgcgtatattaaa
atcgctgaaggctgtaatcaaaaatgtagcttttgtgcgatacccacctttaaaggcaaa
cttaagtcaagaagtcttgaaaatatcatagatgaagtaaaaagactagtccaaaagggc
tactacgattttagctttttatctcaagatagcagctcgtggatgcgtgataatggcgtt
agtgacggacttatatcgcttattgatgaagtagagaagatcaatggggttaaaagcgct
agaattttatacctttatccaagcacaacaacaatggcgttgatcgataggatagttgct
tcgcctgtatttcataactattttgatatgcctatacagcatattagtgataaaatgcta
cgcgtgatgaaacgaggaagcaatgaagcaaaggtgcgtgaaattttaagcgccatgaga
tctactccaaattcatttttaagaaccggcgttatcgtgggacatccaggagagagcgat
gaggactttgactcactttgtaaatttttagaagagtttaaatttgatagaatttcagca
tttgcctactcaagagaggaggatactgctgcatttgatatggagcaaattcctactaaa
atcatctcaaaacgactatcaaagatagaaaaggttattaaaaaaacattagatgatagc
tttagattacaaataggacgcgagataatcgccagtatagaaggcgaaagtagcgagggt
gagatgttttttggtggtaaaatggatgtctgggataaagatatagacggcgaaatttta
attaacgaaagtgatgagcgtgagcttgaagttggtgctaggtatctttgtgaggttact
gactctgttgataacaaattaattgcaagggttataaaaagagcttaa
DBGET
integrated database retrieval system
