Campylobacter californiensis: CCAL_1584
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Entry
CCAL_1584 CDS
T10527
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccaq Campylobacter californiensis
Brite
KEGG Orthology (KO) [BR:
ccaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaq03032
]
CCAL_1584 (topA)
03400 DNA repair and recombination proteins [BR:
ccaq03400
]
CCAL_1584 (topA)
Enzymes [BR:
ccaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCAL_1584 (topA)
DNA replication proteins [BR:
ccaq03032
]
Prokaryotic type
DNA Topoisomerases
CCAL_1584 (topA)
DNA repair and recombination proteins [BR:
ccaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCAL_1584 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
ADK_lid
Toprim_4
Toprim_2
Zn_ribbon_PaaD
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QCD51467
LinkDB
All DBs
Position
1562229..1564337
Genome browser
AA seq
702 aa
AA seq
DB search
MKNLIIVESPAKARTIKNFLGKDYDVIASKGHIRDLPKTSFGIKIENDEFKPEYRVSMDH
SKIVKEIKELAKNADKIYLATDEDREGEAIAFHIANAIGKEATSLPRIVFHEITKSAIDT
ALANPRTINMDSVNAQQTRRLLDRIVGYKLSPLLNLKIQKGLSAGRVQSAALKIIVDRER
EIRAFKPVEYYSIDTMFKKDLEAELIKFEDQKIEKLTITNPDRAKYIVQNLANEKFSVRN
IESKDRKTQPSPPFMTSTLQQSASNALGFSPKKTMMIAQNLYEGVQTHEGFMGAITYMRT
DSLNLAKEAIEAARERIISEYGEKYLPSKPVLYATSSKGAQEAHEAIRPTNLDFTPQIAA
KFLEKDALRLYTLIYNRFLACQMSACISQTQNIYVASQKGEFKISGRKVLFDGFYKAYGD
MDKDKILPNVNVGDEMSLQSIKEEQHFTEPPARYSEAGLIKKLESLGIGRPSTYAPTISL
LTSREYVKIEKKQLVPCEVAFSMIGVLEEHFSNIVDSEFTSQLEEKLDKIAENEADWQRV
LSEFYHPFMDKISSGKTNIKSLKVTVAIGEKCPECGGELVKRKGRYGEFIACGNFPKCKY
SRNIKTQTTNEQTTNDQKPKRELKKLEVPCPKCGGEIVERFSRRGKFYGCGNYPKCDFIS
NYEPVAQKCDECGGDMVKKELKKGTFHECTKCKKKVQVSDAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctaatcattgtagagtcacccgcaaaagcaagaactataaagaatttttta
ggcaaagactacgatgttatcgcttcaaaaggacatataagagatcttcctaaaacaagc
tttggcataaagatagaaaatgatgaatttaaaccagaataccgtgtaagcatggatcac
tcaaagatagtaaaagagataaaagaactagccaaaaatgccgataagatatatctagca
acggatgaggatagagagggagaggcgatcgcctttcatatcgcaaacgctatcggcaaa
gaggcgacttcactacctcgcatagtctttcacgagataactaaaagtgcgatagatacg
gcactggcaaatccaagaactataaacatggacagtgtaaatgcgcaacaaaccagacgt
cttttagaccgtatagtcggatacaagctaagtcctcttttaaatttaaagatacaaaaa
gggctaagcgcgggtcgcgtgcaaagtgccgcacttaaaatcatagtcgatagagaaaga
gagataagagcatttaagcccgtagaatactacagcatagatacgatgtttaaaaaagat
cttgaagcggaactgatcaaatttgaagaccaaaagatcgaaaaactaaccataacaaac
ccggatcgcgcaaaatacatagtgcaaaatttagcaaatgaaaaatttagcgtaagaaat
atagaaagcaaagacagaaaaacgcaaccaagtccgccgttcatgacctcaacacttcaa
caaagcgcatcaaacgcacttggctttagccctaaaaaaacaatgatgatagcgcaaaat
ttatacgagggtgtgcaaactcatgagggctttatgggtgcgataacctacatgagaaca
gacagcctaaaccttgcaaaagaggctatagaggccgcaagagagaggataataagcgaa
tacggagaaaaatatctgccaagcaagcccgtgctttacgcaacaagctcaaagggagca
caagaggctcacgaggcgataagacctacaaatttagactttacaccgcaaatcgcagcg
aaatttcttgaaaaagacgcgcttaggctttatacacttatatacaaccgcttcttggcg
tgtcagatgagcgcttgcataagccaaacacaaaacatatacgtcgcaagccaaaaaggg
gaatttaagataagcggaagaaaggtgctttttgatggattttataaagcttacggcgac
atggataaggataaaattttaccaaacgtaaatgtcggcgatgagatgagcttgcaaagc
ataaaagaggagcagcactttactgagcctcccgcaagatactctgaagctggacttatc
aaaaagcttgaaagccttggcataggaagaccaagtacctatgcgccgaccatatcacta
ctaacatcgcgcgaatacgtaaagatcgagaaaaaacaactcgtaccttgtgaagtggcg
tttagtatgataggtgttttagaggagcattttagcaatatcgtagatagtgaatttact
tctcaactagaagaaaagcttgacaaaatagccgaaaacgaagccgactggcaaagagtg
ctaagcgagttttatcatccttttatggataaaatttcaagcggtaaaacaaatataaag
agcctaaaagtaactgtcgctatcggagaaaaatgcccagagtgcggtggagagctggta
aaacgcaaaggacgatacggagagtttatcgcgtgcggaaatttcccaaaatgcaaatat
tcaagaaatataaaaacacaaacaaccaatgaacaaacgactaatgatcaaaagccaaaa
agagagcttaaaaagcttgaagtcccatgtccaaaatgcggcggcgaaatagtcgagaga
ttttcaaggcgagggaaattttacggatgtggcaactatccaaaatgcgactttataagc
aactatgagccagtagctcaaaaatgcgacgagtgcggcggagatatggtaaaaaaagag
ctcaaaaaagggacttttcacgaatgcacaaaatgcaaaaaaaaggtgcaagtatcagac
gcagagtga
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