Campylobacter californiensis: CCAL_1673
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Entry
CCAL_1673 CDS
T10527
Symbol
ispA
Name
(GenBank) geranyl diphosphate synthase / farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ccaq Campylobacter californiensis
Pathway
ccaq00900
Terpenoid backbone biosynthesis
ccaq01100
Metabolic pathways
ccaq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccaq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CCAL_1673 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccaq01006
]
CCAL_1673 (ispA)
Enzymes [BR:
ccaq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CCAL_1673 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CCAL_1673 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
CCAL_1673 (ispA)
Prenyltransferases [BR:
ccaq01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CCAL_1673 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF5331
Motif
Other DBs
NCBI-ProteinID:
QCD51550
LinkDB
All DBs
Position
complement(1648541..1649443)
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AA seq
300 aa
AA seq
DB search
MSLLDDFINFLNENLPKAPSFHPYYEEALAQMLKAGGKHFRAQLLLGTVNALRPELTQEA
MRVALGLEMMHTYSLIHDDLPSMDNAALRRGKPTLHIMYDEVTAILAGDALNTHAFYEIS
RSNLSPEVRIKCVEILSQNAGANGMVLGQALDCFYENTDKKDIVAAKQRLGLTDKKLSLD
ELKFLHIHKTAKLIAASLKMAAVIAELSETECEKIYNIGLDLGLAFQIQDDIIDVISDEN
EAGKPVNNDTDKNSFTNLLGVKGAIESKNELIRRVEEDLRSLKAGIKDVIENLINKHLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttgcttgatgattttataaattttttaaatgaaaatttgccaaaagcccctagc
tttcatccttattatgaagaggctttagcgcagatgctaaaggctggcggtaagcatttt
agggcacagctgcttttgggcacggttaatgctttgcgtccggagctaacacaagaggct
atgagggttgctttagggcttgagatgatgcatacgtattcgctcatacacgacgatctg
ccgtctatggacaatgccgctttaagacgcggaaaacctacccttcacataatgtatgac
gaagttacggcgatacttgccggagatgcgttaaatacgcacgctttctatgaaatttca
cgttcaaatttaagtcccgaagttaggataaaatgtgttgaaattttaagtcaaaatgcc
ggagctaacggcatggtgcttggtcaggcgttggattgtttttatgaaaataccgacaag
aaggacatagtagctgcaaaacaaagactaggtctaacggataaaaaactaagtcttgac
gaactaaaatttcttcacatacacaagaccgcaaagcttatcgccgctagcttaaaaatg
gctgcagttatagcagagctaagtgagactgaatgcgaaaaaatttataatatcgggctt
gatttgggacttgcatttcagatacaagatgacatcatagatgtgataagcgatgagaat
gaagcaggcaagcctgtaaacaatgatacggataaaaattcatttacaaatttgctcggt
gtcaagggcgctatagagagtaaaaatgagctaatacggcgggttgaagaggacttgcgg
tcacttaaagcaggcataaaagacgtgatagaaaatttgataaacaagcatttgaaaggt
taa
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