Campylobacter californiensis: CCAL_1681
Help
Entry
CCAL_1681 CDS
T10527
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccaq Campylobacter californiensis
Pathway
ccaq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccaq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCAL_1681 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaq03021
]
CCAL_1681 (rpoA)
03400 DNA repair and recombination proteins [BR:
ccaq03400
]
CCAL_1681 (rpoA)
Enzymes [BR:
ccaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCAL_1681 (rpoA)
Transcription machinery [BR:
ccaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCAL_1681 (rpoA)
DNA repair and recombination proteins [BR:
ccaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCAL_1681 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QCD51558
LinkDB
All DBs
Position
complement(1654034..1655044)
Genome browser
AA seq
336 aa
AA seq
DB search
MRKITTSAYMPTEIKVESVSENVAKITAYPFEAGYAVTLAHPLRRLLYTSTVGFAPTGVK
IKGVSHEFDSMRGMLEDVAFFIINLKKIRFKLKNDSDREVIEYSFKGPKEITGADLNNDI
VEIVNPDAYLATINEDAELNFSVIIQKGIGYVPSEEIRDEMEEDYIALDAFFTPVKKAVY
DIESVLVEDNPDFEKIVFTITTDGQVGPIEAFKHCLEAMYQQMSVFKGVLDIDVNMPVSN
SSVGGEHGKLLSNVEELNLSARSFNCLDKAEIRYIGELALMDENELKELKNLGKKSLEEI
KAVMEEIGYPVGTDILKDSKEQLKKKIAELKSQMSV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaattactacatcagcttatatgcctactgagataaaagttgaaagtgtaagt
gaaaatgtggctaagattaccgcatatccgtttgaggcgggttatgcagtaactcttgct
catccgcttcgtcgtcttctttatacaagcaccgtaggttttgcgcctacaggtgttaaa
ataaagggcgtaagtcatgaatttgatagcatgcgcggtatgcttgaggatgttgccttt
tttattataaatttaaaaaagatacgctttaagcttaaaaatgactctgatagagaagtt
atcgagtatagctttaaggggccaaaagagataactggagccgatcttaacaatgatata
gttgagatagttaatccagatgcttatcttgcaaccataaacgaagatgctgaattaaat
ttcagtgttattattcaaaagggtataggatatgttcctagcgaagaaattcgcgacgag
atggaagaagactatatagcgcttgatgcgttttttactcctgttaaaaaggctgtatac
gacatcgagagcgttttggttgaagataatcctgattttgaaaagattgtttttacaatc
actacagatggacaagttgggcctattgaggcatttaaacactgcttagaggctatgtat
cagcaaatgtctgtatttaagggtgttttagatattgatgtaaatatgcctgtttctaac
tcaagtgtaggcggtgagcacggtaaattgctttcaaatgttgaagagctaaatttaagt
gctagaagttttaactgcctagataaagctgaaattagatacattggcgaacttgccttg
atggatgaaaacgaacttaaagagctaaaaaacctcggcaaaaaatctcttgaagagata
aaagccgttatggaagagatcggttatcctgttggaactgatatcttaaaagatagtaaa
gagcagctcaaaaagaaaattgctgagctaaaatcgcaaatgagcgtataa
DBGET
integrated database retrieval system
