Campylobacter californiensis: CCAL_1795
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Entry
CCAL_1795 CDS
T10527
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ccaq Campylobacter californiensis
Pathway
ccaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCAL_1795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaq03019
]
CCAL_1795
Enzymes [BR:
ccaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCAL_1795
Messenger RNA biogenesis [BR:
ccaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CCAL_1795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QCD51659
LinkDB
All DBs
Position
1766352..1767725
Genome browser
AA seq
457 aa
AA seq
DB search
MSFSNLGLSTELLRAIKEAGYTAPTTIQAKAIPAVLAKKDVMASAQTGTGKTASFTLPIL
EHLQNSHKKGKKDIKALVLVPTRELALQVAASVETYGKFLYFKSAVIFGGVDTYTQKRIL
KKGVDIVIATPGRLLDLASQECVDLSKVEHFVLDEADRMLDMGFVHSIKKIISFLPKDRQ
SLMFSATFSAQIKSLADGLLNSPVLIEAEARNTTSHNVTQSVHHVDKQRKKELLLHMLNT
NDWRQILVFTRTKHGANKLNESLVANNISSTAIHGNKSQSARLKALKDFKNGNAKVLVAT
DIFARGIDIQDLPYVVNYELPDVAEDYVHRIGRTGRAGNKGEAISLVCVDEHYYLSQIEK
LINQKINVIETAGFEVDKSIKPEPIRARRVKTSGQNRGDEAKFKSRNNRTKTSKKRSSND
ALSYTNSTSRDSKFRSNSSHTRTNKPRSSKFGSSAIN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcaaatttaggtctaagcacagaacttctacgtgctatcaaagaggcgggc
tatacagctccaacaaccatccaagcaaaggcgataccggccgtattagccaaaaaagat
gtcatggctagcgctcaaacaggcactggtaaaaccgctagttttacactccctatactc
gagcacctgcaaaattctcacaaaaaaggcaagaaagacataaaggctctcgtcctagtt
cccacaagagagcttgcacttcaagtcgcagctagtgttgagacttatggtaaatttctt
tattttaagtcagccgttatctttggcggagttgatacatacactcaaaaaagaatttta
aaaaagggtgttgatatcgtgatagcaacaccgggaagactgctagatctcgcatcacaa
gagtgtgtggatctatcaaaagtcgagcattttgtgctggatgaagccgataggatgctt
gatatgggatttgtccatagtatcaaaaaaatcatctcttttttaccaaaagatagacaa
agtttgatgttttcagctactttttcagcgcagataaagagcctagccgatgggcttcta
aactcaccggtgcttatagaagcagaagctagaaacacaacttcacataacgtaacgcaa
agcgtccatcacgtagataaacagagaaaaaaagagcttttacttcatatgcttaacaca
aatgactggaggcaaattttagtctttacacgcacaaaacacggcgcaaacaagcttaac
gaatctcttgtagcaaacaatatctcttcaactgccatacatggaaacaagtcgcaaagc
gcaagactaaaagctctaaaagactttaaaaatgggaacgcaaaggttcttgtggcaaca
gacatatttgcaagaggtattgacatacaagaccttccttacgtcgtaaactacgagcta
ccggatgttgctgaggactacgtgcacagaataggcaggaccggacgtgcgggcaacaag
ggtgaggcgatatcgctggtttgtgtcgatgagcactactatctatcgcagatagaaaag
ctaataaatcaaaaaataaacgtgatagaaacggctggttttgaggtcgataaaagcata
aagcctgaacctataagggctagaagagtcaaaacatcgggtcaaaacagaggcgacgag
gcaaaatttaaaagccgtaataaccgcacaaaaacatctaaaaaaagaagctccaatgat
gccttatcttatacaaacagcacgtcaagagatagcaaatttagatcaaacagctcgcac
actagaaccaacaaacctagaagctctaaatttggaagcagcgctataaactag
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