Cyprinus carpio (common carp): 109045522
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Entry
109045522 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109045522
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109045522
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109045522
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109045522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
TOR1L1_N
HEAT_EZ
Cnd1
Sec7-like_HUS
MMS19_C
ParcG
Dopey_N
DUF5740
TAN
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
109045522
NCBI-ProteinID:
XP_042589396
UniProt:
A0A9Q9WTR4
LinkDB
All DBs
Position
B11:complement(23672674..23749848)
Genome browser
AA seq
1680 aa
AA seq
DB search
MEPNMEYIVAQVTQKEVGRRFQVGPEIIDYILDRQKSHDLEHDQSMLDRMVDSLATSWVN
ASNFKVALLGMDIVSALVTRLQERFKTQIGTVLPSLIDRLGDSKDQVRDQAQSLLLKIMD
QAANPQYVWDRMLSGFRHKNIRSREAVCFCLIATLNVYGAQGLTLSKIVPHICHLLGDPA
SQVRDGAMNCLVEIYRHVGERVRVDLGKKGLPQSRLNVIFSRFDGVQRSGNMILSSDKSI
DDDESVDGGRSSSTSKGASSVRRTGSMRRPSSASSTKSSGKESSGAGAVDEEDFIHAFED
VPAVQIYSPRELEDSMNKIREILSDDKHDWEQRVAALKKVRSLLLAGASDYDVFLQQLRQ
LEGPLKLSAKDLRSQVVREACITLGILGVRVVLPGRRLLNRRQICGLSFSLDNLERLIPL
GDYLAKVATTFSGQPCFNGVILTLVGPEQALVMEQEVNTLLRKGAIEVVPPLNRVSGFYS
RYFIVPKNDGGLHLILDLRQLNHSGPVHTNADSTMMQARLSPAWIELILTAIARVKEGRS
LTVKHFQKLLGLTAAVSNFSRFLKMAKDSAAGIESFVCLFPLQHTHYPRLIPIMTSNCTS
KSVAVRRRCYEFLDLLLQEWQTNSLERHVAVLIETIKKGVHDADSEARSVARKCYWGFHA
HFSKEAEHLFQALELTYQKALQSHLKSSDSIMSLPQSDRSSSSSQESLNRPLSVKTPGSN
LSKTKVVSSRASSSSGSLQRSRSDVDVNAVASAKSRMPAVAATAPFSSAAALPPGSYASL
GRVRTRRQSSETAAGGGASVTDSRGRSRAKAVSQSQRSRSANPVGGKTHAGSRSSSPGKL
LARSSMRIPRSAGSAGAPTDKRSKIPHSQGCSRETSPSRARDVRASRIPRPSMSQGCSRD
TSRESSRDTSPARGFSPLDRFGLIHQAMRILNTGTEVEAAVADALRRPMRRRYESPGTHI
TTLTANNHTSSSERSNTPQLNGAAPHYLRQTEDVAEILNHCASSNWSERKEGLLGLQSLL
KSQRVLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLLDFITLHREDLQDWLFILLTQL
LKKMGADLLGSVQAKVQRALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIE
SLARQMDPSDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQMVLIALFELNTPEFTMLLG
ALPKTFQDGATKLLHNHLKNSSNAAAVSQASPSGSSSVGRTPPRHPVTRSSPLNSPTNGS
HGGLSPSRLWGWSSKPSSSLPPPHPGPATPPLRAYRRAFSPSMLEYDTENMNSEEILSSL
KGVTEAIQSFSFRSKEDILEPIKHDGKREDTTGVDPRVSAGVMEGGRMALDNKTSLLNTP
SPRSFSGPWAREYNHSDSISAYEKGALAMFDDMEHIPDGRPQDCGENKILHPKGYSAGPG
PHLEMIGDLLKELSNHSERVEERRAALLELLKVTRDDSLVVWEEHFKTMLLLLLETLGDK
DHTIRALALRVLKEIMRSQPERFKNYAELTIMKTLEAHKDCHKEVVRAAEETASTLAGSI
HSEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIPQDSLIPLLPDIIPGLLQGYDNTES
SVRKASVFCLVAIYSVIGEDLKPHLQQLTGSKMKLLNLYIKRAQTTNSTSSSSSDVSSHS
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaacatggagtacatagtggcgcaggtcacgcagaaagaggtcggacgtcgg
tttcaagtcgggccggaaatcatagactacatcctggacagacagaagtcacatgacctg
gagcacgatcagagcatgctggacaggatggtggacagtctggcaacctcatgggtcaac
gcgagcaatttcaaggtggcgctgctgggaatggacatagtatctgctttagtgaccaga
ctacaggaacgcttcaaaacacaaataggaacagttctgcccagtttaattgatcgttta
ggtgactctaaggaccaggttcgggatcaagcgcagtcgcttctgttaaaaatcatggac
caagcggccaatccgcagtatgtttgggaccgaatgctgtccggattcagacataaaaac
atccggagcagagaagctgtttgcttttgccttattgccactcttaatgtatacggagct
cagggtttaacccttagcaagatagttcctcatatctgtcatctgttaggagacccagcg
agtcaggttcgggacggtgcgatgaactgtctggtggagatttacagacacgtgggggag
agagtgagggtggatctggggaagaaggggctgccgcagtcacgactgaatgtgatcttc
agcaggtttgatggtgtccagaggtctgggaacatgattctgtcctcagataagagcatc
gatgatgacgaatcggtggatggaggtcgttcctcgtcgacctctaaaggagcgtcatcg
gtgcggcggacaggatccatgcgcagaccgagctctgcgtccagcaccaagagctcaggt
aaggagagctctggtgccggtgctgttgatgaagaagacttcatccatgcctttgaagat
gtgccagccgtacagatttactcacctcgagagctcgaggactccatgaacaagatccga
gaaattctgtccgatgacaaacacgattgggaacagcgagtagctgcactgaaaaaggtt
cgttctctgctgttggccggcgcgagcgactacgatgtttttttgcagcagttacggcag
ctggaggggccgctcaaactctcggctaaagatctgcgctcgcaggtggtgcgcgaggcc
tgtatcacactcggaatattgggagtcagagtggtgctcccaggccgaaggcttctaaac
agaaggcagatctgtggactgtcattctcgctggataatctggagagactgattccccta
ggagactatttggcaaaagtggctaccacgttcagcggtcagccttgttttaacggggtg
attctcactctggtgggccccgagcaggctctggtaatggaacaagaagtaaacactctc
ttaaggaagggggccattgaggtggtccctcctctcaacagagtttccgggttctacagc
cggtacttcatcgttccgaagaatgatggagggttgcatctgattttagatctgcgtcag
ttgaaccactcaggccctgtccacacaaacgcggattcgaccatgatgcaggcacgtttg
tctcctgcttggatcgagttgatcctcactgcaatcgcgagagtgaaagaaggccggtca
ctcactgttaagcactttcagaaactgctgggtctgacggcagctgtgtccaactttagc
cgattcttgaagatggctaaggactcagctgctgggattgagtcttttgtttgtttgttt
cctcttcagcacactcactatccacgtctgattcccatcatgaccagtaactgcacttct
aaatcagtggcggtcagacgacgctgttatgagtttttagatcttctgcttcaggagtgg
cagacaaattctctcgagaggcacgtcgctgtcctgatagaaaccattaagaaaggagtt
catgatgccgactctgaggccagatcagtcgctaggaaatgttactggggtttccacgcc
cacttcagtaaggaggcggagcatctgtttcaggcgctggaactgacctatcagaaggcg
ctccagtctcacctgaagagctccgacagcatcatgtctctgccgcagtccgaccgctcg
tcctccagctcgcaggagagcctcaatcggccgctgtctgttaaaacacctgggagcaac
ttgagcaaaactaaagtggtgagttctcgcgcatcctcttcgtccggctctctccagcga
tcgcgcagtgatgtggacgtgaacgccgtggccagtgccaaatcacgaatgcctgctgtt
gctgctaccgcccccttcagctcagccgcggcactgccgcccggatcctacgcctctctg
ggtcgtgtgcgaacaagacgacagagttcagagacggcagctgggggcggagcttctgtg
actgacagtagggggcggagccgagccaaagctgtgtcccaatcacagcgatccagatca
gctaatccggtggggggtaaaactcatgcgggcagccgctctagttcacctgggaagctc
ttggctcgctcttccatgagaatccctcgatccgccggatccgctggagcgccgacggac
aaacgcagtaagatcccacacagtcaaggctgcagtcgagagacgagccccagccgcgcg
cgagacgtgcgggccagtcgtatcccgcggcccagcatgagtcagggctgtagtcgtgac
accagtcgggagagcagcagagacaccagtccagctcgagggttcagtccgctggatcgg
ttcggtctcatccatcaggccatgcggatcttgaacacgggcacagaggtggaggcggcc
gtggcagacgctctgcggaggccgatgcggcggcgctacgaatctcccggcactcacatc
acaacactaacagctaacaaccacacatccagctccgaacgctccaacaccccccagctc
aacggcgccgccccgcattacctgcgtcagacggaggacgtggccgagatcctgaaccac
tgcgccagctccaactggtccgagaggaaagaagggctgctgggactccagagcctcctg
aagagccaaagagtgctcagtcgcgtggagctgaagagactgtgtgagatcttcactcgg
atgtttgcagatcctcacagcaagagagtgttcagcatgttcctggagacgctgctggac
ttcatcacgctgcaccgagaggatcttcaggactggctcttcattcttctcacgcagctg
ctgaagaaaatgggggccgatcttctgggctccgttcaggccaaagttcagcgggccctc
gacgtcaccagggactcttttccgtacgatcagcagttcaacatcctgatgcggtttatc
gtggatcagactcagaccccaaacctcaaggtgaaggtggccatcctgaagtacatcgag
tctttggccagacagatggatccgtcagactttgtgaactccagcgagactcggttagcc
gtctctcgaatcatcacgtggaccacagagccgaagagctcagacgtcaggaaggctgct
cagatggttctgatcgccctgtttgagctgaacaccccagagttcaccatgctgttagga
gctctgcccaaaacctttcaggacggagccactaaactcctgcacaaccatctgaagaac
agcagtaacgctgctgcagtgtctcaggcgtctcccagcggcagcagcagtgtgggacgc
acccctccacgacacccggtgacccgcagcagcccgctgaactcacccaccaacggctca
cacgggggtctgtcacccagtcgtttgtggggctggagctcaaagccttcttctagcctc
cctcctccccaccctggccctgccaccccccctctccgggcctatcggagggcgttttcg
cccagtatgctggagtacgacaccgagaacatgaactcagaggaaatcttgagctcgttg
aaaggtgtaaccgaagccatccagagcttcagtttccgcagtaaggaagacatactcgag
cccatcaaacatgatggcaagagggaagatacgaccggtgtggatccacgtgtatcagct
ggtgtgatggaaggaggccggatggcgctggacaacaagacgtcattattaaacacaccg
tcccctcgatcgttcagcggcccatgggctcgcgaatacaaccacagcgactccatcagc
gcctacgagaaaggagcgctcgccatgtttgatgacatggagcacatcccagatggtcgt
ccacaggactgcggagaaaacaaaatcctgcatccgaaaggttattctgcaggacccggg
ccacacctggagatgattggtgatctgctgaaggagctgtccaatcacagcgagcgtgtg
gaggagaggcgggccgctctgctggagctgctgaaggtcacgcgtgatgacagtctggtc
gtgtgggaggagcatttcaaaaccatgctgctgctgctgctggagacgctgggagacaaa
gaccacaccatccgagcgctggctctgcgtgtcctgaaggagatcatgcgcagtcaaccg
gagcgcttcaagaactacgcagaactcaccatcatgaaaaccctggaggcccataaagac
tgtcacaaagaggtggtgcgggcggcagaagaaacggcgtccacgctggccggatccatc
cactctgagcagtgcatcaaagtcctgtgtcccattgtccagacggccgactatcccatc
aacctcgccgctattaaaatgcagaccaaagtaatcgagcgcattccccaggattccctg
attccactcctgcccgacatcatcccgggactcttacagggttatgataacacagagagc
agcgtacgcaaggccagtgtgttttgtttggtggccatttattctgtcatcggtgaagat
ctgaagcctcatctgcagcagctgaccggcagcaagatgaagctgctgaatctgtacatc
aagcgagctcaaaccaccaacagcaccagcagcagttcttcagatgtctcgtctcacagc
tga
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