Cyprinus carpio (common carp): 109045548
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Entry
109045548 CDS
T05134
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04080
Neuroactive ligand-receptor interaction
ccar04082
Neuroactive ligand signaling
ccar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109045548
04082 Neuroactive ligand signaling
109045548
04519 Cadherin signaling
109045548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109045548
Ion channels [BR:
ccar04040
]
Ligand-gated channels
GABA-A
109045548
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
GEP7_C
Motif
Other DBs
NCBI-GeneID:
109045548
NCBI-ProteinID:
XP_042603651
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Position
B21
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AA seq
485 aa
AA seq
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MRRSETQRDMAGVLRKLAAYIPCVWIFLMLFDPSLQTRAVTGHREPIPDDSKDNITIFTR
ILDRLLDGYDNRLRPGLGESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKF
DGPMQVLPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHA
ECPMHLEDFPMDAHACPLKFGSYAYTNNEVVYIWTADDEKSVSVAPDGSRLNQYDLLGHV
IGKETISSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTV
FGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAW
DGQKEAQEMRRRESASFSKKTNNTFNIVGTTYSMSVAKDPGLTTVSKSATSTSTSTPSQP
VREIRLPKMDGEYVPEGGRKSYNRVSKVDKISRIIFPVLFFIFNLAYWATYVNRKPAINR
SSPQK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgttcagaaactcagagagatatggctggcgttctccgcaagctcgcagcatac
atcccctgcgtgtggatcttcctcatgcttttcgaccccagcttgcaaaccagggctgta
acaggtcacagagaacccattcccgatgacagcaaagacaacatcaccatctttacccgg
atcttggaccgcttgctggatggttacgacaacagattgcgtcctggactaggagaaagt
gtgacggaggtgaggacaaacatctatgtgacaagcttcgggccagtgtcagacaccgat
atggaatacacgattgatgtgttcttccggcaaagttggcgggatgagaggctgaagttt
gatgggcctatgcaggttcttccacttaacaacttgctcgccagcaagatctggactccg
gatactttcttccacaatggcaagaagtcagtggctcacaatatgactacacccaataaa
ctcctgcggctggtagacaacggaactcttctctacacaatgagattaaccatccatgct
gagtgtcctatgcatctggaggattttcctatggatgcccatgcctgccctctgaagttc
ggaagctatgcctacaccaacaacgaggttgtctacatctggacagcagatgatgagaaa
tctgtttctgtggctcctgatggttctagactcaaccagtatgacctgttgggccatgtg
attggaaaagagaccatcagctccagtacaggagaatatgtggtgatgacaacgtatttc
catttgaaaaggaaaattggctattttgtgatccagacgtatctcccctgcataatgacc
gtcattctgtctcaggtctccttctggttgaaccgggagtccgttccagcacgtaccgtc
ttcggtgtcacaactgtcctgaccatgacgacactgagcataagcgcccggaactcactt
cccaaggtggcctatgcaacagctatggactggtttatggcagtgtgctatgcttttgtc
ttctctgctctcatcgagtttgccactgtcaactacttcacaaagcgcagctgggcctgg
gatggtcagaaggaggcccaggagatgcggaggcgagagtcagcttccttctccaagaag
accaacaacactttcaacatcgtgggaaccacctacagcatgagcgtagccaaagatccc
ggactgacaaccgtctccaagagtgccacatccacatccacatccaccccatcccagccg
gtccgagagatccggctgcccaaaatggatggtgaatatgtaccggagggtggaagaaag
tcatacaatcgtgtcagcaaagtggacaagatctctcgtatcatctttccagtgctcttc
ttcatcttcaacctggcttactgggccacttacgtcaacagaaagccagccatcaaccgg
tccagcccacagaaatga
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