Cyprinus carpio (common carp): 109045844
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Entry
109045844 CDS
T05134
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109045844 (brf1a)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
109045844 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_N
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
109045844
NCBI-ProteinID:
XP_042593209
UniProt:
A0A8C1KFB9
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Position
B13:21317175..21357503
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AA seq
671 aa
AA seq
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MRKCKNCGGTDIDVDQARGDAVCMGCGSVLEDNIIVSEVTFVENSGGGSSAVGQFVAGDS
SGNVPSLGGNFHTGVGRESRAATLQNAKRQINHLGHQLQMNQHCLDTAFNFYKMALCKHL
TRGRKSSHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLVLARELCINAPAID
PCLYIPRFAQMLEFGEKSHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHEF
RRTIKEVISVVKVCEATLRKRLNEFEDTPTSELTIEEFMRVDLEQECDPPSYTAGLRKQK
LKQIEQELAKKVDDIEGEICGYQDEIEVELESCRPKARGIYASCSKDDDVISLASSSILA
GDEEGEDDELRAAASHLCSTICGEDGDGNEQDRDGEKVSPTKRPSLALLLGALPTAASLG
LPESITKMREEKENDVEAENGELDLSGIDEDEIDRYILNEKEVKVKTELWMLQNADYLKE
QKEKEERIAKEKEEGTYKERKPRKKARRREPINASTADEAIEKMLEQKRISTKINYDVLK
DLNKSSPKSPTRQTDESSAGAKRTPTARQRKPQLTSPKIGKMISSFGKRLQPLVCAQPSK
KLALDQKGFDAPVATPAAPSQNAVVVESGPVAYEEPAEEEEEDEEEEHCVSAMQLMGGTD
YGCEVDDDDGF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagtgtaagaactgtggggggacagacattgatgtggaccaggcccggggtgat
gctgtgtgcatgggctgtggctctgtgctggaggacaacatcatcgtttccgaggtaacc
ttcgtggagaacagtggaggaggatcgtccgccgttggccagtttgttgctggtgactca
tctggaaatgtgccatcattgggaggaaacttccacactggggttgggagggagtccaga
gctgccacactgcagaatgctaagcgacagataaaccatcttgggcatcagcttcaaatg
aatcagcactgtctggacactgccttcaacttttacaagatggccctctgcaagcatctg
accagagggcgtaaatcatcccatgtcatcgccgcctgtctctacctcgtctgccgaacg
gagggaacacctcacatgctgctggacttgagtgacctcctgcaagtgaatgtgtatgtt
ttggggaaaaccttccttgttttagccagagagctgtgtatcaacgcgcctgctattgat
ccatgtctttatatcccgcgttttgcgcaaatgctggaatttggagagaagagccatgag
gtttcaatgacggcactgcgtctcctgcagaggatgaagagagactggatgcacacggga
cgaagaccttcaggcctctgcggagcagcgctcttggttgcggcccgtatgcacgagttc
cgtcgcacaattaaggaagtgatcagtgtggtgaaagtctgtgaagccacacttaggaaa
aggctgaatgaatttgaggacacgcccaccagtgagctgacaatcgaagagttcatgcgg
gtggatctggagcaggagtgtgacccaccctcttacacagctggactcaggaagcaaaag
ctaaaacagattgaacaagagcttgcaaagaaagttgatgatattgaaggtgaaatctgt
ggatatcaggatgagattgaagtcgagctagagagctgtaggcccaaagccagggggatt
tatgcatcctgttccaaagatgatgatgtgatttccttggcatcgtccagcatccttgct
ggtgatgaggaaggagaggatgacgagctgagggcagcagcatctcacctgtgcagtact
atatgtggagaggatggagatggcaatgagcaggaccgagatggagagaaagtctctcca
accaaacggccctcgttagcattactgcttggagcgctccccactgcggccagtttgggc
ctgcctgagtccatcaccaaaatgagagaggaaaaggagaatgatgtggaggcagaaaac
ggtgagctagatctgagcggtattgacgaggatgagatcgatcggtatatccttaatgag
aaggaagttaaggtaaagactgaactgtggatgcttcaaaatgcagactacctcaaagaa
cagaaagaaaaggaggagagaatagcaaaggagaaggaggagggtacatataaagagcgg
aagcctagaaaaaaggcacggaggcgtgagcccattaatgccagcactgcagatgaagcc
attgaaaagatgttggagcagaaacgcatctccactaaaataaactacgatgttctgaaa
gacttgaacaaatccagcccaaaaagtcccactcgccagactgatgaatcttctgctgga
gccaaaagaacccccacggcccgccaacggaaaccacaactgacttcacccaagattggg
aaaatgatcagcagctttggcaagaggttacagcccctagtgtgtgcgcagccctctaag
aagctggccctcgatcagaaagggtttgacgccccagtggccactcctgctgccccgtcc
cagaatgctgtagttgtggagagcggaccggtggcgtacgaagagcctgcagaagaagaa
gaggaggatgaggaggaagaacactgtgtcagtgccatgcagttaatgggcggcactgat
tacggctgtgaagtggatgatgatgatggcttctga
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