Cyprinus carpio (common carp): 109045922
Help
Entry
109045922 CDS
T05134
Name
(RefSeq) Usher syndrome type-1G protein
KO
K21878
Usher syndrome type-1G protein
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109045922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109045922
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109045922
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
109045922
NCBI-ProteinID:
XP_018919279
Ensembl:
ENSCCRG00000019079
LinkDB
All DBs
Position
A12:24648830..24656572
Genome browser
AA seq
488 aa
AA seq
DB search
MNDKYHRAARDGHLHLLKEATRKDLNAPDEDGMTPTLWAAHHGNLDALRLLVARGGDPDK
CDIWGNTPLHLAAANGHLNCLSFLVSFGTNVWCLDNDYHTPLDMAASRSHMDCVRYLDTI
AAKQITINPRVVSKLKDRAFRNAEKRIKNCEKLQRRHHERMEKHFLRESAAMDTSDTMSN
SSFSSTLSRRIPQFNALDSNMTYSQATLQSTTRGRTKIQRRLEKKKQADGTFKISEDGRK
SVRSLSGLQLGNDVMFLKQGTYVDRRQQSSPRLNIRNMFSGKQDIRPDDDDEVDTVSRAL
SDPGLYDAAYSEISTDSGRDSLFNRPGLGTMVFRRNYVTDGLFQMGRNEGSVVGSEPVGR
VPNVHLRGRLPLRSPSLDEVSLGSSLSLQEKNLQDLPWEEGDLGLEEEDDELQSSSGPLE
VFLASQGLSDFLSIFHREQMDLEALLLCSEQDLISIHIPLGPHKKLLDACSRRNNALDDA
DGMQDTML
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaataccaccgggcggctcgagacggtcacctgcacctgctgaaagaggcg
acgcgcaaagatctgaacgcgccggatgaggatggaatgacgccgacgctctgggccgcg
caccacggcaacctggacgcgctcagactgctggtggcacgaggaggagatccagataaa
tgtgatatttggggaaacactcctcttcacctggcagcagctaatggccatctcaactgt
ctgtcctttctggtgtcatttggcaccaatgtgtggtgcttggacaatgactaccacaca
ccactggacatggcggcctctaggagccacatggactgtgtgcgatatctggacacaatc
gccgccaaacagatcaccatcaaccccagagtggtgagcaaattaaaggatcgtgccttc
cgtaatgcagagaaacgcattaagaactgtgaaaagcttcagcgcaggcatcacgaacgc
atggagaagcatttcttgagagagagtgctgcaatggacacatcagatacgatgagtaac
agcagtttcagcagcaccctgagccgaaggatccctcagttcaacgccctcgactccaac
atgacatactcacaggcaacgcttcagtctacaactagaggccggacaaagattcagcgg
cgtcttgagaagaagaagcaagccgatggaacgttcaagatatctgaagatgggcgaaag
agtgttcgctcgctctctggtcttcagctgggcaatgacgtcatgttcttgaagcagggt
acatacgtcgaccgacgccagcagtccagccctcggctcaacatccgtaacatgttttct
ggtaaacaggacatcaggccagatgatgacgacgaggtagacactgtttcccgggctctc
agtgatccaggtctgtatgatgctgcatactccgaaataagtacagactctggtcgggac
tctttgttcaaccgcccaggactcggtaccatggtattccgtcggaattatgtaactgat
gggttgttccaaatgggacggaatgagggcagtgtggtggggagtgaaccagtgggacga
gtcccgaatgtccacttacggggaagattgccgttgcgatcacccagtcttgatgaagtc
agcttaggcagctcattgagtctccaagagaagaacttgcaggatttgccatgggaggaa
ggagacctgggtttggaggaggaggatgacgagcttcagtcatcgtcgggtcctttagaa
gtattcctggcatctcagggactgagtgacttcctttcaattttccatagagaacagatg
gacctggaggcgttgctcttgtgctctgagcaagacctcattagcatccatatcccactc
ggacctcacaaaaaactacttgatgcatgcagtagacgcaacaatgctctggacgatgct
gatggcatgcaggacactatgttgtag
DBGET
integrated database retrieval system