Cyprinus carpio (common carp): 109046058
Help
Entry
109046058 CDS
T05134
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180-like isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109046058
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109046058
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109046058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
CRISPR_assoc
zf-ANAPC11
zf-HC5HC2H
RNA_pol_Rbc25
C1_2
Motif
Other DBs
NCBI-GeneID:
109046058
NCBI-ProteinID:
XP_042634888
UniProt:
A0A9Q9ZA77
LinkDB
All DBs
Position
A21:complement(10557939..10562236)
Genome browser
AA seq
466 aa
AA seq
DB search
MATSVVCMFLTKEEDQLVTLEGPINLRCRKCRRCLRDSRSLLKVITSREAAATCSVWHLN
VESLPDWIFASVDQANWTVGKLKCQYCGARLGGFNFVNCSKCSCGHDTAVHLSKSRVDQD
LKPPVLLTRLGRTREQPVRKENEVESLPQTINSSSSPSSALNFSCTVSRVASPETELEVE
SSEEPQILEIVERGTDFYLPYELPPQLSDYLESLEEWQVHSASQSRTSLDRAVNPKEVRL
RVMEEPSRNISPNLEPKYSKREKNRLKSLRRKQRKKERWIQRQQEEKDLAMKWDLTGSDD
EEREGYTCAVCLDVYYSPYKCHPCSHVFCEPCLRTLAKNRPSNTLCPLCRTLISHVLFQE
ELSQTTKTCFPKVYRSRHETFQKTNYSKWPLPNCPKRFRIFWGFQRHGGPASRWQFPHRA
FGLDALDLGDMWGWPFDIDFIIISIYSLHWVMAFIIFCGLCYFLLL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctacctctgtggtgtgtatgtttttgaccaaagaagaagatcaattagtgacacta
gaaggtccaataaaccttcgctgcagaaagtgccgtagatgtctaagagactcaagaagc
ctccttaaggtaataacatcaagggaggctgcagccacatgcagtgtgtggcatttgaat
gttgaatctttgccagattggatttttgcaagtgttgatcaggccaattggacagtgggg
aaattaaaatgtcagtactgtggagctcgcttaggaggctttaattttgtaaattgctcc
aaatgctcctgtggacatgatacggctgtgcatctcagtaagagtcgtgttgatcaggat
ttaaaacctccagttcttttgacaagactaggaaggactagagaacaacccgtgaggaag
gagaatgaggtggagtctctccctcagacaataaactcatcctcatctccttcctcagcc
ctcaacttctcctgtactgtgtcccgtgtagcctctcctgaaactgaacttgaggttgag
tcaagtgaagaaccacagattcttgagattgttgagagaggcacagatttttatttacct
tatgaactgccaccacagctgtctgattatctggagagcttagaggaatggcaagtgcat
tccgcttcccagagcagaacctctctggacagagctgtgaatccaaaggaggtcagatta
agagtgatggaagagccatcaagaaacatctcacccaacctagaaccaaagtattccaag
agagagaaaaaccgcctgaaaagcctaagaaggaagcagaggaagaaggaacgttggatt
cagagacagcaggaggaaaaagatctggctatgaaatgggacttaacgggcagcgatgat
gaagagagggagggatacacatgtgccgtgtgtttagacgtatattacagcccttacaag
tgccatccttgcagtcatgtgttctgtgagccctgtttgagaactctggctaagaacagg
ccaagcaataccctgtgtcccctctgtaggacccttatatcccacgtgctctttcaggaa
gagctcagtcaaactacaaagacgtgcttcccaaaagtgtatcggtcaagacacgagacc
tttcagaaaaccaactattccaaatggcccctgcccaactgtccaaagcgtttccgcatc
ttttggggatttcagagacatggaggacctgccagtcgctggcaatttccccacagagca
tttggcttggatgcgttggatctgggggacatgtggggctggccatttgacattgacttt
atcatcatctctatctactctctgcactgggtgatggcgttcatcatcttttgtggcctc
tgctacttcctcctcctctga
DBGET
integrated database retrieval system
