Cyprinus carpio (common carp): 109046175
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Entry
109046175 CDS
T05134
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109046175
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109046175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109046175
03009 Ribosome biogenesis [BR:
ccar03009
]
109046175
04131 Membrane trafficking [BR:
ccar04131
]
109046175
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109046175
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109046175
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109046175
Membrane trafficking [BR:
ccar04131
]
SNARE
SNARE associated proteins
Others
109046175
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109046175
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109046175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
AAA_18
ATPase
DUF815
nSTAND_NTPase5
ABC_tran
IstB_IS21
NB-ARC
TsaE
ResIII
AAA_24
NACHT
Viral_helicase1
SLFN-g3_helicase
PROSCOOP16
Zot
Motif
Other DBs
NCBI-GeneID:
109046175
NCBI-ProteinID:
XP_042580431
LinkDB
All DBs
Position
B5:complement(13469312..13477797)
Genome browser
AA seq
908 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETIVEVPNVTWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKAN
LRKSPISKDVDVDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFSSHPVTKEE
VDQVRALLVAVEATSSMRTTMMIFMDKCDHVADPHRPLFKQAAMYKRQKIKNSTFLGLCF
LLIIFCFSSHVQSPSFLFASFSFCPPPPSIDREACSCLCFALVCERISENFNLNVLWVGV
NFSENHTR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtggagaatccaaaaatgatgatctttccactgccattctgaagcagaag
aacagaccaaataggttgattgttgatgaatccatcaatgaagacaacagtgttgtctct
ctctctcaggcaaagatggatgagctccagctctttaggggggacacagtgctgttgaag
ggcaagaagaggagggagaccgtttgcatcgtcctgtctgatgacacgtgctccgacgaa
aaggttcgcatgaacagggtggtccgcaacaacctcagggtgcgccttggggatgtcatc
agtattcagccatgtccagatgtgaaatatggaaagcgcattcacgttctgcccatcgat
gacacagtggagggcatcactggcaacctatttgaggtctatcttaagccttacttcttg
gaggcttaccgaccaatccgtaaaggtgatattttcctggtcagaggaggcatgcgcgct
gtggagttcaaagtggtggagaccgatcccagcccatactgtattgtggccccagacaca
gtgatccactgtgagggggagcccatcaagagagaggatgaggaagagtctctgaatgag
gtgggttatgatgacattggaggggtaaggaaacagctcgcccaaatcaaagaaatggtg
gagctacctctgagacacccagctctcttcaaggctattggagtgaagcccccccgtggc
attctgctgtatggaccccctggaactggaaagactcttatcgctcgtgctgtggcaaat
gaaactggagcattcttcttcctcatcaatggacctgagatcatgagtaaactggcaggt
gaatctgagagcaatttgcgcaaggcttttgaggaagcagagaagaacgcaccagccatc
atctttattgatgaacttgatgccattgcaccaaaaagagagaagactcatggtgaggtg
gagaggcgcattgtgtctcagctgctcactctgatggacggactgaagcaaagggctcat
gtcattgtcatggcagccactaacagacccaacagcattgacccagctctcaggcgattc
gggcgctttgacagagaggtggacatcggcattccagacgctactggaagacttgagata
cttcagatccacaccaagaacatgaagcttgcagatgatgttgatctggagcaggttgca
aatgagacccatggccatgtgggtgctgatctggctgccctttgctcagaggctgccctg
caagccattcgaaagaaaatggacctcattgatctggaggatgagaccatcgacgcagag
gttatgaactccctggctgtaacaatggatgacttcaggtgggctcttagccagagcaac
ccatctgccctgagagagaccattgtggaggtgcccaacgtcacctgggaggatattggt
ggccttgatgatgtcaagagagagctgcaggagctggtgcagtacccagtggaacatcca
gacaaattccttaagtttggcatgaccccatccaagggtgtgctgttctatggaccacca
ggttgtggtaaaaccctcctggccaaggccattgccaatgagtgccaggccaacttcatc
tcaatcaagggcccagaactgctcaccatgtggtttggagaatcagaggctaatgtccgt
gagatctttgacaaggctcgtcaagctgctccttgtgtgctcttctttgacgaattggac
tccattgctaaggctcgtggtggaaacgttggcgatggtggcggcgctgctgacagagtc
attaaccagattctcacagaaatggatggtatgtccagcaagaagaacgtcttcatcatt
ggggccaccaacagaccagacatcattgaccctgccatcctcaggcctggccgactggac
cagcttatctacatcccactgcctgatgagaagtctcgcattgccattctcaaagctaac
ctcaggaagtctccaatctcaaaggatgtggacgtggactacttggccaagatgaccaat
ggcttttccggtgctgacttgactgagatctgtcagagagcctgtaaactagccatccgt
gagtctattgagaatgagatcagacgggaacgtgagaggcagactaacccttctgcaatg
gaggtggaggaggatgaccctgtgcctgagattagaaaggaccattttgaggaagccatg
cgctttgcccgccgctccgtcagcgataacgacatccgcaaatacgagatgttcgcacag
accctgcaacaaagcagaggctttggcagtttcagttcccatccagtaaccaaggaggaa
gtggaccaagtcagggctcttctggtggcagtggaggcaacatcttcaatgaggacaacg
atgatgatctttatggataaatgtgaccacgtggctgaccctcacaggccactctttaaa
caggccgccatgtacaaaagacaaaaaataaaaaattccacatttttaggactgtgcttt
ttgttgattattttctgcttctcctctcatgtccaatcccccagttttttattcgcctcg
ttctccttctgtccacctcccccctctattgatagagaagcatgtagctgcttgtgtttt
gctctggtttgtgaaaggatttctgagaactttaatcttaacgttctgtgggtgggggta
aatttcagtgaaaaccatacacgatag
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