Cyprinus carpio (common carp): 109046179
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Entry
109046179 CDS
T05134
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109046179
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109046179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109046179
03009 Ribosome biogenesis [BR:
ccar03009
]
109046179
04131 Membrane trafficking [BR:
ccar04131
]
109046179
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109046179
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109046179
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109046179
Membrane trafficking [BR:
ccar04131
]
SNARE
SNARE associated proteins
Others
109046179
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109046179
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109046179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
109046179
NCBI-ProteinID:
XP_042612544
UniProt:
A0A9Q9Y2P0
LinkDB
All DBs
Position
A5:24263634..24273042
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPISKDVDLDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
SGPSQGSSGGGGGPIFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtggagaatccaaaaatgatgatctttccactgccattctgaagcagaag
aacaggccaaataggctgattgttgatgaatccatcaatgaagacaacagtgttgtgtct
ctctctcaggcaaagatggatgagctccagctctttaggggggatacagtgctgttgaag
ggcaagaagaggagggagaccgtttgcatcgtcctgtctgatgacacctgctctgatgaa
aaggttcgcatgaatagggtggtccgcaacaacctcagagtgcgccttggtgatgtcatc
agtattcagccatgtccagatgtgaagtatggaaagcgcattcacgttctgcccatcgac
gacacagtggagggcatcactggcaacctgtttgaggtctatcttaagccttacttcttg
gaggcttaccggccaatccgtaaaggtgatattttcctggtcagaggcggcatgcgtgct
gtggagttcaaagtggtggagactgaccccagcccatactgtattgtggccccagacaca
gtgatccactgtgagggggaacccatcaagagagaggatgaggaagagtctctgaatgag
gtgggttatgatgacattggaggggtaaggaaacagctcgcccaaatcaaagaaatggtg
gagctgcctctgagacacccagctctcttcaaggctattggagtgaagcctccccgtggc
attctgctgtatggaccccctggaactggaaagactctcatcgctcgtgctgtggcaaat
gaaactggagcgttcttcttcctcatcaatggccctgagatcatgagtaaactggcaggt
gaatctgagagcaatttgcgcaaggcttttgaggaagcagagaagaatgcaccagccatc
atctttattgatgaactcgatgccattgcaccaaaaagagagaagactcatggtgaggtg
gaaaggcgcattgtgtctcagctgctaactctgatggacggactgaagcaaagggctcat
gtcatcgtcatggcagccactaacagacccaacagcattgacccagctctcaggcgattc
gggcgctttgacagagaggtggacatcggtattccagatgctactggaagacttgagata
cttcagatccacactaagaacatgaagcttgcagatgatgttgatctggagcaggtggca
aatgagacccatggccacgtgggtgctgatcttgccgccctttgctcagaggctgccctg
caagccatcagaaagaaaatggacctcatcgatctggaggatgagactattgatgcagag
gttatgaactccctggctgtgacaatggatgacttcaggtgggctcttagccagagcaac
ccctctgccctgagagagacagttgtggaggtgcccaacatcacctgggaggatattggt
ggtcttgatgatgtcaagagagagctgcaggagctggtgcagtacccagtggagcatcca
gacaaattccttaagtttggcatgaccccatccaagggtgtgctgttctatggaccacca
ggttgtggtaaaaccctgctggccaaggccattgccaatgagtgccaggccaacttcatc
tcaatcaagggcccagaactgcttactatgtggtttggagaatcagaggctaatgtccgt
gagatctttgacaaggctcgtcaagctgctccttgtgtgctcttctttgacgaattggac
tccattgctaaggctcgtggaggaaacgttggtgatggtggcggcgctgctgacagagtc
attaaccagattctcacagaaatggatggtatgtccagcaagaagaatgtcttcatcatt
ggggccaccaacagaccagacatcattgaccctgccatcctcagacctggccgactggac
cagctaatctacattccactgcctgatgagaagtctcgcatggccattctcaaagctaac
ctcaggaagtctccaatctcaaaggacgtggacctggactacttggccaagatgaccaat
ggcttttcaggtgctgacttgactgagatctgtcagagagcctgtaaactggccatccgt
gagtccattgagaatgaaatcagacgggaacgtgagaggcagaccaacccttctgcaatg
gaggtggaggaggatgaccctgtgcctgagattagaaaggaccattttgaggaagccatg
cgctttgcccgccgctctgtcagcgataacgacatacgtaaatacgagatgttcgcacag
accctgcaacaaagcagaggctttggcagtttcagattcccatccagtaaccaaggagga
agtggaccaagtcagggctcttctggtggcggcggaggccccatcttcaatgaggacaac
gatgatgatctttatggataa
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