Cyprinus carpio (common carp): 109046299
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Entry
109046299 CDS
T05134
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109046299
Membrane trafficking [BR:
ccar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
109046299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
TEN_NHL
NHL
TEN_YD-shell
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
109046299
NCBI-ProteinID:
XP_042603947
UniProt:
A0A9Q9XLB3
LinkDB
All DBs
Position
B21:complement(1814643..1833087)
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AA seq
1150 aa
AA seq
DB search
MAFGCASGSVLVYMIDSSTGSMQLSHKLELTPKHYPDIWNKTGAVKMVRWSPDCSVVMVT
WDCGGLSLWSVFGAHLICTLGEDFSCHSDGTKKEPLKISSMSWGVEGYHLWVICSTDGAE
GDEKLQQTGILQFQFIKSALTVNPCTSNQEQVLLHGEDRLYLTCGDPTQAHSVSDKSPSR
DSGSPVHRPSASTPLSQGLSTLLGHKHWQVVQIHSTYLETNWPIRFAAIDWSGQCVAVAG
RRGFAHYSLYTRKWKLFGNVTQEQNMTVTGGLTWWDDFVVVACYNFIDRQEELRLYVRTS
NLDNVFASVTKLQADTLLLNVFRNVVILFRADCSICLYSIERRHDSPNPSVSVELLQEVS
MSRYIPHPGLVVSVTLTSVRTETGITLKAPQQACSAESILLNLAGQLIMLQRDRSGPQVR
EKDTPANQTKLLPFCPPVVLAQCVENVWTTCRSNRKKRHLMEALWLSCGEAGMKVWLPLF
PRDHRKPHSFLSRRIMLPFHINIYPLTVLFEDALILGASNETAVFDGTGSSSLEALFPFC
TVERTSQIYLHHILRQLLVRNLGEQALMLAQSCATLPYFPHVLELMVHVVLEEEATSREP
IPDPLLPTVAKFVTEFPLFLQTIVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDT
AASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMIRFLKAIGSGESETPPSTPT
TQEQSSTGGFEFFRNRSISLSQSADSIAGGKFNLQKALSVPSGPSSKGGERWCKDSDSAE
NLYIDMMLWRHARHLLEQVRLRDLGCFSAQLGFELIGWLCRERTRVARIDDFVAALKCLH
KDFLWPFPVIPACSISSPLKNGRCRPVLSSRLLKSQSADSLLNSDMDTTPPQVTTANHSW
LDSLGEVSKELDSASSHGGPQTHEAFLSPLINKGEECSIGSATDLTETSSMVDGDWTMVD
ENFSTLSLSQSELEHISMELANKGPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILRDAGV
IKQVVGFLDSPEVPAETVQSIRAGLKAVDLWASSDCLGYKPFLNLIGPQLLKLLEVPVEQ
VQAEAFQPTGASKLSDPPLLLLPRAEELTAAHPLPSDGPAGASARPLDDTPPQPEEQEPL
EEGSYDCTLS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggctttcggatgcgcaagcgggtcagtgttggtgtacatgattgacagctctacagga
tcgatgcagctctctcataaactggagttaaccccgaaacactacccagatatctggaat
aagacgggtgctgtgaagatggtccgctggtctccagactgcagtgttgtgatggtgacg
tgggactgtggcggtctgtctctgtggagtgtgtttggagctcatctcatctgcacactc
ggggaggacttctcctgtcactcagacggcactaagaaagagcctctgaagatcagctct
atgagctggggtgtggagggatatcatctgtgggtgatctgcagcacagacggagcagaa
ggagacgagaaactccagcagaccggcattctgcagtttcagttcattaagagcgcgctg
accgtcaacccgtgcacaagtaatcaggagcaggtgttgctccacggagaggatcgtctg
tatctgacctgtggagacccgactcaggctcacagcgtgtcggataagagcccgtctcgg
gacagcggcagtccggtgcaccggccgtcagcgtccacccctctctctcagggtctcagc
actttactgggccacaagcactggcaggtggttcagattcacagcacatatctagagaca
aactggcccatcaggttcgcagctatagactggtctggtcagtgtgtggccgtagctggc
cggcgtggatttgcacattactcattatacaccagaaaatggaaactgtttggtaacgtc
acacaggagcagaacatgacggtgacgggaggtctcacgtggtgggatgactttgttgtt
gttgcctgttataatttcattgaccggcaggaagagctgaggttatacgtgcgcacatct
aacctggacaacgtgtttgccagcgtcactaaacttcaggccgacacgctgctgctgaac
gtgtttcgtaacgtggtgattctgttcagagccgactgctccatctgcctttacagcatc
gagagacgacacgacagtccgaacccgtcggtcagtgtggagctgctgcaggaggtctcc
atgtcccggtatattcctcaccccggtctggtggtgtctgtgaccctcacgtcagtccgg
acagagaccggcatcacgctcaaagccccgcagcaggcctgttcggcggagagtatcctg
ttgaatttggccggtcagctgatcatgctgcagagagaccgatccggcccacaggtacgg
gagaaggacacgccagccaatcagacgaagctgcttccgttctgtccgccggtggttctg
gctcagtgcgtggagaacgtctggaccacctgccgcagcaaccgcaagaaacgccacctg
atggaggctctatggctctcgtgcggcgaggcggggatgaaggtgtggcttcctctgttc
ccgcgagaccaccgcaagccgcactcgttcctgtcgcgccggatcatgctgcccttccac
atcaacatctacccgctcaccgtgctgttcgaggacgcgctcatcctgggcgcctccaac
gagacggcggtgttcgacgggaccggctcgtcctcgctggaggcgctcttccccttctgc
acggtggagcggacgtcccagatctacctccatcacatcctgagacagctgctggtgcgt
aacctgggcgagcaggcgctgatgctggcgcagtcctgtgccacgctgccgtacttccct
cacgtcctggagctgatggtgcacgtggtgctggaggaggaggccacgtctcgagagccc
atccctgacccgctgctgcccaccgtcgccaagttcgtgaccgagttcccgctcttcctg
cagaccatcgttcactgcgcacgcaagactgaatacgcgctgtggaactacctgttcgcc
gcggtggggaaccccaaagacctgttcgaggagtgtctgatggcacaggatctggacacg
gccgcgtcctacctgatcatcctgcagaatatggaggttccggcggtcagccgtcaacat
gccactctgctcttcaacacggctctggaacagggcaaatgggatctgtgtcgtcacatg
atccgcttcctcaaggccattggttcaggggagagcgagactccgcccagcacacccacc
acacaggagcagagctccacgggcggcttcgagttcttccggaaccgcagcatcagtctg
tctcagtcggccgacagcatcgccggaggaaagttcaacctgcagaaggccctgagcgtg
ccgtctggaccgtcctccaaaggcggggagcgctggtgtaaggacagtgactctgcggag
aatctctacattgatatgatgctgtggcgtcacgcgaggcacctgctggagcaggtcagg
ctgcgggatctgggctgtttctccgcccagctgggcttcgagctgattggctggctgtgt
cgagagcgcactcgggtcgcacggatcgacgacttcgttgcagccctcaaatgcctgcac
aaggacttcctgtggccatttcctgtaatcccagcatgctccattagctcgccgctgaag
aacggacgctgccgcccagtgttgagttctcgtttgctgaagtctcagtctgcggacagt
ttgctgaacagtgacatggacaccacgccccctcaggtcaccacagccaatcacagctgg
ctggacagtttgggggaggtctcaaaggaactggactccgcctcctctcacggagggccg
cagacacatgaggcgtttctctctcctctcatcaacaaaggagaggagtgcagcatcggt
tcagccacggacctgactgagaccagctccatggtggacggtgattggacgatggtcgac
gagaatttctccaccctcagtctcagccaatcagagctggagcacatctccatggagctg
gccaataaagggccacataagagtcaggtgcagctgcggtatctgctgcacgtcttcatg
gaggccggctgtctggagtggtgcgtcgtcatcgggctgatcttacgggacgccggcgtc
attaagcaggtcgtggggtttctggacagtccagaagtcccagcagaaacggtccagagc
atccgagccgggctgaaagctgtcgacctctgggcctcgtctgattgtctgggctacaag
ccgttcctgaacctgattggtccgcagctgctgaagctcctggaggttcctgtggagcag
gtccaggccgaagccttccagccgaccggagcgtccaaactgagcgatcctccgctgctg
ctgctgccccgagccgaggaactgaccgctgctcacccgctgccctcggacggccccgcc
ggagccagcgcccggcccctggacgacacgccgccgcagccggaggagcaggagccgctg
gaggaggggtcgtacgactgcacgctctcgtga
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