KEGG   Cyprinus carpio (common carp): 109046319
Entry
109046319         CDS       T05134                                 
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109046319 (nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109046319 (nup54)
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109046319 (nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA LPP
Other DBs
NCBI-GeneID: 109046319
NCBI-ProteinID: XP_042634400
UniProt: A0A9Q9ZAG3
LinkDB
Position
A21:complement(155505..170304)
AA seq 521 aa
MAFNFGGASSNASLSGTGFGAATTTSASTSFGFGSGATGAFGGFGSTTSAGAGTNFNFST
PSNAGASLFGNTQNKGFGFSSGLGSSAPAGTGFGGALGGTGLGFGGFAGLQPTQNQQGGL
FNQQASQSSQLFNTASALSAPSVLNDERDSILARWNQLQAFWGVGKGYYSSSTPPVEFSQ
ENPFCRFKAVGYSCVSDVKDEDGLVALALNKKEADVRSQQQQLVESMHKVLGGNPTLSVN
VEGVRALPDDQTEMIIYLVERSPNGTSKRVPASTLYSYMEQLNVKSALQQLGVIMAVSRT
ALTPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKIQDQMTKQ
HQTRVDIISNDISELQRNQATTAAKITQYKRKLMDLSHRVLQVLIKQEVQRKSGYAIQLD
EEHLRVQLETIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYRVDADLLREIKQH
LKHQQQGLSHLISVIKDDLDDIKMIEDGLHDSVHGRSSKLS
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcgttcaacttcggcggcgcgtccagcaacgcgagtctttctggcacgggcttcgga
gccgcgaccacaacatccgcgtccacgagcttcggcttcggctcgggcgccacgggtgcg
ttcggggggttcggctccaccacctccgccggcgccggcaccaacttcaatttctccacg
ccgtcaaacgcaggtgccagtctctttggaaacactcagaataagggcttcggcttctcg
tcgggtctgggctccagtgcaccggcggggacgggcttcggcggcgctctgggcggcact
ggactgggctttggaggattcgctgggctccagcccactcagaaccaacaaggaggcctg
tttaaccagcaggcgtctcagtccagtcagctctttaacacggccagtgctctctccgct
ccgtcggtgctcaacgacgagcgcgactccattctggcccgatggaaccagctgcaggcc
ttctggggagtagggaagggttactacagcagcagcacaccaccggtggagttcagccag
gagaaccccttctgccgcttcaaggcggtgggctacagctgtgtttctgatgtgaaggat
gaggatggtttagtggctcttgctctcaataagaaggaagctgacgttcgctctcagcag
cagcagctggtcgaatcgatgcacaaggttctgggaggaaatccaactctttcggtcaac
gtggagggagtgcgagcgctgcccgatgaccagacggagatgatcatttatctggtggag
cgctctcctaacggcacgtcgaagcgcgtcccggcgtccacgctctacagctacatggag
cagctgaacgtgaagtctgcgctgcagcagctgggggtcatcatggcggtcagtcgcacc
gcactgaccccggcgcagctcaagcagctgctgcagaacccgcccgcaggtgtggatccc
atcatctgggaacaggccaaagtggacaatccagacccagagaagttgattccggtgccc
atggtgggcttcaaagagctgctgcgcagactgaagatccaggatcagatgaccaaacag
caccagaccagagtggacatcatctctaacgacatcagcgagctgcagaggaatcaggcc
acgaccgccgccaagatcacgcagtacaagcgcaagctgatggacctctcacacagagtg
ctgcaggtgttgattaaacaggaagttcagaggaagagtggttacgccattcagctggac
gaggaacacctgagagttcagctggaaaccatccaatcagagctcaacgcaccgacacag
ttcaaggggcgactgaatgaactcatgtctcagattcggatgcagaatcattttggagcc
gttcgttcagaagagcgttaccgtgttgatgctgacctgctgagagaaatcaaacagcat
ctgaagcaccagcagcagggtttgagtcacctgatcagcgtcattaaagacgatctggac
gacatcaagatgattgaagacgggcttcacgacagcgttcacgggcgcagcagcaaactc
agctga

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