Cyprinus carpio (common carp): 109046319
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Entry
109046319 CDS
T05134
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109046319 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109046319 (nup54)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109046319 (nup54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
LPP
Motif
Other DBs
NCBI-GeneID:
109046319
NCBI-ProteinID:
XP_042634400
UniProt:
A0A9Q9ZAG3
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Position
A21:complement(155505..170304)
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AA seq
521 aa
AA seq
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MAFNFGGASSNASLSGTGFGAATTTSASTSFGFGSGATGAFGGFGSTTSAGAGTNFNFST
PSNAGASLFGNTQNKGFGFSSGLGSSAPAGTGFGGALGGTGLGFGGFAGLQPTQNQQGGL
FNQQASQSSQLFNTASALSAPSVLNDERDSILARWNQLQAFWGVGKGYYSSSTPPVEFSQ
ENPFCRFKAVGYSCVSDVKDEDGLVALALNKKEADVRSQQQQLVESMHKVLGGNPTLSVN
VEGVRALPDDQTEMIIYLVERSPNGTSKRVPASTLYSYMEQLNVKSALQQLGVIMAVSRT
ALTPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKIQDQMTKQ
HQTRVDIISNDISELQRNQATTAAKITQYKRKLMDLSHRVLQVLIKQEVQRKSGYAIQLD
EEHLRVQLETIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYRVDADLLREIKQH
LKHQQQGLSHLISVIKDDLDDIKMIEDGLHDSVHGRSSKLS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaacttcggcggcgcgtccagcaacgcgagtctttctggcacgggcttcgga
gccgcgaccacaacatccgcgtccacgagcttcggcttcggctcgggcgccacgggtgcg
ttcggggggttcggctccaccacctccgccggcgccggcaccaacttcaatttctccacg
ccgtcaaacgcaggtgccagtctctttggaaacactcagaataagggcttcggcttctcg
tcgggtctgggctccagtgcaccggcggggacgggcttcggcggcgctctgggcggcact
ggactgggctttggaggattcgctgggctccagcccactcagaaccaacaaggaggcctg
tttaaccagcaggcgtctcagtccagtcagctctttaacacggccagtgctctctccgct
ccgtcggtgctcaacgacgagcgcgactccattctggcccgatggaaccagctgcaggcc
ttctggggagtagggaagggttactacagcagcagcacaccaccggtggagttcagccag
gagaaccccttctgccgcttcaaggcggtgggctacagctgtgtttctgatgtgaaggat
gaggatggtttagtggctcttgctctcaataagaaggaagctgacgttcgctctcagcag
cagcagctggtcgaatcgatgcacaaggttctgggaggaaatccaactctttcggtcaac
gtggagggagtgcgagcgctgcccgatgaccagacggagatgatcatttatctggtggag
cgctctcctaacggcacgtcgaagcgcgtcccggcgtccacgctctacagctacatggag
cagctgaacgtgaagtctgcgctgcagcagctgggggtcatcatggcggtcagtcgcacc
gcactgaccccggcgcagctcaagcagctgctgcagaacccgcccgcaggtgtggatccc
atcatctgggaacaggccaaagtggacaatccagacccagagaagttgattccggtgccc
atggtgggcttcaaagagctgctgcgcagactgaagatccaggatcagatgaccaaacag
caccagaccagagtggacatcatctctaacgacatcagcgagctgcagaggaatcaggcc
acgaccgccgccaagatcacgcagtacaagcgcaagctgatggacctctcacacagagtg
ctgcaggtgttgattaaacaggaagttcagaggaagagtggttacgccattcagctggac
gaggaacacctgagagttcagctggaaaccatccaatcagagctcaacgcaccgacacag
ttcaaggggcgactgaatgaactcatgtctcagattcggatgcagaatcattttggagcc
gttcgttcagaagagcgttaccgtgttgatgctgacctgctgagagaaatcaaacagcat
ctgaagcaccagcagcagggtttgagtcacctgatcagcgtcattaaagacgatctggac
gacatcaagatgattgaagacgggcttcacgacagcgttcacgggcgcagcagcaaactc
agctga
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integrated database retrieval system