Cyprinus carpio (common carp): 109046564
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Entry
109046564 CDS
T05134
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109046564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109046564
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
GTPases
109046564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
109046564
NCBI-ProteinID:
XP_042615417
UniProt:
A0A9Q9Y859
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All DBs
Position
A7:complement(8460320..8550569)
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AA seq
1121 aa
AA seq
DB search
MGHTSLEKIIALQKKTSCIRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYTTGGNDFLINLIDSPGHVDFSSEVSTAVRLCDGAIIVVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLIVELKLTSQEAFTHLQKILEQVNAVTGSL
FTSKVLEERAEKDAEAQSSCTENSSADQVYDWSAGLEETDDSDLYFSPDRGNVVFASAID
GWGFRIHQFAEMYSQKMGIRSSVLLKTLWGDFYLNAKAQKIMKGAQSKGKKPLFVQLVLD
NIWSMYDAVVTRRDKEKVEKMVTSLGLKVMSRDLRHSDPKVLLSAICSQWLPVSQAVLSM
VCEKLPCPAEISAERVEKLMSVGARRFDSLPEKTQELKKAFLDCSADDTAPVIVFVSKMF
AVDSKALPQNKQRPLTQEEISQRRELARQRHAERQAANQSAESPRSADAGGTSTPAGPAG
SAVTDALCAQTEALSVKAAVEEENKEHFVAFARVYSGIIRKGQKVFVLGPKYNPSLALRA
LPEGCSVADVLPSIPHMACCTVDRLYLLMGRELEDLDEVPSGNVLGIGGMEEFILKSATI
STSPACPPFTPLSFEATPIVRVAVEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHV
LVTAGEVHLQRCLDDLRERFAKIEISVSEPIIPFRETVIRPPKMDMVNEDLGKQQKVAVI
HQVKEEQMKIPEGVQVDSTGLVTLTTSNKMATVGVRAIPLPEEVTRLLEDNVELIRTMEQ
FSLFAWEDKTLDINQKILENIQDFKVKLESNLQGHKWRGAVEHIWAFGPRRFGPNILLNN
IEGYRRPSVWQCLEREKETERAEIRDFDNSIVSGFQLATLSGPMCEEPLMGVCFSVETWD
MKISVPQAQQDSVDEDSQPSEPNNDDQSERSDMHETSSNRSRSRAEAAGGSVDCYGPFSG
QLIAAMKDTCRYAFQAKPQRLMAAMYTCEIMATAEVLGRMYAVLSKREGRVLQEEMKEGT
DMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIGSDPFWVPTTEEEYLHFGE
KADSANQALKYRNAVRRRKGLYVEEKLVEHAEKQRTLSKNK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacacaagtttggagaagataattgcactgcagaagaaaacatcatgcatcagg
aatctgtgcattcttgcccacgtagatcatgggaagacgacattagcagactccctggtg
gcaagtaatgggattatatccagtcgtttagctggaaagctgagatatctggacagcaga
gaagatgagcagatcagaggaatcactatgaagtccagcgctatttcattacattacaca
acaggaggaaacgatttcctcattaatctgatcgactctcccggtcacgtggacttctcc
tcggaggtgtccactgccgtcagactgtgtgatggggccatcattgttgttgatgccgtc
gagggagtgtgtccgcagacacaagttgttctacgacaagcttggctggagaatatccgt
cctgttcttgtcatcaacaaaatcgaccggctgatcgtggagctgaaactcacttcacag
gaggcgttcactcacctgcagaaaatactagagcaggtgaatgcagttaccggctcgtta
ttcacctctaaagtcctggaggagcgagcagagaaagacgcagaagctcagagcagctgt
acagagaacagcagcgcagatcaggtgtacgactggagcgcaggtttagaagaaaccgat
gactcggacctctacttcagtcctgaccgcggaaatgtggtgtttgccagcgctatagac
ggctggggcttcagaattcatcagtttgctgagatgtacagtcagaaaatgggcatccgc
tcctcggttctgctcaagaccctgtggggcgatttctacctcaacgccaaagcccaaaaa
atcatgaagggagctcagtccaaaggaaagaaacctctgtttgtgcagcttgtcctggat
aacatctggagtatgtatgatgctgtggtcactagaagggacaaagaaaaggtggagaag
atggtgacctctctggggttaaaggtcatgtctcgtgacctgagacactcggaccccaaa
gtgctcctcagtgccatctgtagccagtggcttcctgtgtctcaagctgtgctctcaatg
gtgtgtgaaaagctgccctgcccagctgagatctcggcggagagagtggaaaagctgatg
agcgtgggagcgcgcaggttcgactctctgcctgagaaaacgcaggagctaaaaaaggcg
tttctagattgttcggctgatgatacggcgccggtaatcgtctttgtgtcaaagatgttt
gctgtggactccaaagctctgccacagaacaaacagaggccattgactcaggaggagatc
tcccagagaagggagctggccaggcagcggcacgcagagagacaagctgccaatcagagc
gcagaaagcccccggtcagctgatgctggagggacttcaaccccagcaggcccggccggc
agtgctgtcacagatgctctgtgtgcgcagacagaggctctttcggtcaaagctgcagtc
gaggaggaaaacaaagagcattttgtggcctttgcacgagtctacagcggcatcatcaga
aaaggtcaaaaggtgttcgtgctcggacccaaatacaacccgtcgctggcgctcagagcg
ctgcctgaaggttgttcagtagctgatgttttacccagcatccctcacatggcctgctgt
accgtggacagactctacctgctgatgggccgcgagctggaggatctggatgaagttccc
tcaggaaatgttctcggtattggcggaatggaggaattcattctcaagtcggccaccatc
tcaacatctccggcctgcccgcccttcacgccactcagctttgaagccacgcccatcgtc
agagtagcagtcgagcccaaacatccaagtgagatgccgaagctggtgcgaggaatgagg
ttactgaaccaggccgacccgtgtgccgaagtgttgattcaggagacaggagagcatgtt
ctggtcactgcaggggaagtgcatctacaacgctgcctggatgacttgagagagaggttt
gctaaaattgaaatcagtgtatctgaaccaatcattccgttccgtgagacggtgatccgg
cctcccaaaatggacatggtgaacgaggacctgggaaagcagcagaaggtggcggtgatt
caccaggtcaaggaggaacaaatgaagattcccgaaggcgttcaggtggattccaccggt
ctggtcacgctcaccacctctaacaagatggccacggtcggggtgcgggctattcctctt
cctgaggaagtcacccgccttctggaggacaatgtagagctcatccgcacaatggagcag
ttcagcctgtttgcctgggaggacaagactctggacatcaaccagaaaatcttggagaac
atccaggatttcaaggtgaagttggagagcaacttgcaaggccacaaatggaggggagct
gtggagcatatctgggcatttggtccacgccgtttcggcccaaatattctcctcaacaat
atcgagggctaccggagaccctctgtgtggcagtgtctggaacgagagaaggaaacagaa
agggcagagatcagagactttgacaacagcattgtgagtggcttccagttggccacgctt
tctggtcccatgtgtgaggagcctttgatgggggtttgcttctctgtcgagacctgggac
atgaagatttctgtacctcaagctcagcaagactcagtcgatgaggattcacaaccttca
gagccaaataatgatgaccaaagtgagcgttctgacatgcatgagacgagctctaaccga
agcaggagcagagcggaggccgcagggggttcggtggactgttatgggccgttctcaggg
cagctcatcgctgctatgaaggacacctgcagatacgccttccaagctaaacctcagcgg
ctgatggctgccatgtatacatgtgaaatcatggccactgctgaggtcttgggtcgaatg
tatgctgttctgtccaagcgggaaggacgagtcttacaagaggagatgaaggaagggaca
gacatgttcattattaaggctgtacttcctgttgctgagagtttcggattcgctgacgag
atcaggaagagaactagcggcctggccagcccacagctagtgttcagccactgggaggtc
atcggcagtgatccattctgggttcccactactgaagaggagtacttacactttggagaa
aaagcagactcggccaatcaggctctgaaatacaggaacgccgttcgcagacgcaaaggc
ctctacgtggaggagaagctcgtagaacatgcggaaaaacagcgaactctcagcaagaac
aaataa
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