Cyprinus carpio (common carp): 109046568
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Entry
109046568 CDS
T05134
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04080
Neuroactive ligand-receptor interaction
ccar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109046568
04082 Neuroactive ligand signaling
109046568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109046568
Ion channels [BR:
ccar04040
]
Ligand-gated channels
GABA-A
109046568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF6768
Motif
Other DBs
NCBI-GeneID:
109046568
NCBI-ProteinID:
XP_018919870
Ensembl:
ENSCCRG00000038467
UniProt:
A0A8C1KB39
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Position
A21:complement(19874005..19901488)
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AA seq
439 aa
AA seq
DB search
MAWIRTCFFLSCVGQVLAEPPTATRIYLDNITRVLDRLLDGYDNRLRPGFGGPVTEVKTD
IFVTSFGPVSDVEMEYTMDVFFRQTWIDDRLKFEGPIEILRLNNLMVSNIWTPDTFFRNG
KRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPM
SEIVYTWKKGPLFSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMG
FFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT
AMDWFIAVCFAFVFSALIEFAAVNYFSTLQANKELRRVNMACAAARSDGELVTNPLDPGG
VLKKRLNSLSQRDAPDRFSRPPQPDFHQQGSTVPANNMLTGTSIIDKYSRILFPLSFGAF
NLVYWIVYLTKDTMESREV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatacgcacatgttttttcctgtcttgtgttggtcaggtgttggcagagccg
ccaaccgcgacgaggatatatttggataacattacgcgcgttttggatagattattagat
ggatatgacaacagactccgacctggatttggaggacctgtcacagaggttaaaacggac
atctttgtcaccagctttggtcctgtttctgatgtggaaatggaatacacaatggatgtg
ttttttcggcaaacctggatagacgaccggctgaaatttgagggccccattgagatcctg
cgtctcaacaacctaatggtcagcaacatttggacaccggacactttcttccgaaatggc
aaacgttctatttcacacaacatgaccactcccaacaagctgttccgcatcatgcagaac
ggaactattctgtacaccatgaggttaaccatcaatgctgagtgtcccatgcggctgatc
aattttccaatggatggacattcatgtcctttgaaatttggcagctatgcctacccaatg
agtgagattgtttacacatggaagaaagggccgttattttcagtggaggttcctcaggag
agttccagcctgctacagtatgatctcattggacagacggtgtctagtgagaggctgaag
tcaaacacaggtgaatacatagtcatgacggtgtacttccacctgcagaggaaaatgggt
ttcttcttgatccagacatacatcccgtgcatcatgactgtgatcctggcacaggtctcc
ttctggatcgacaaagagtcagtaccggccagaactgtgtttggcatcaccacagtacta
accatgaccacgctaagcattagcgctcgtcactccttacccaaggtctcctatgccacc
gccatggactggttcatcgctgtctgcttcgcgttcgtcttctcagcccttatcgagttc
gctgctgtcaactatttctccaccttgcaagccaataaggagcttcggcgggtcaacatg
gcctgtgctgcggccagaagtgatggagaacttgttacgaatcctctggaccctggaggt
gtgttgaagaaaaggctgaactcactctctcaaagagatgctcctgacaggttctccaga
ccaccacagcctgatttccatcagcaaggttccactgtccctgccaacaacatgctgaca
ggaactagtattattgacaagtactcacgcatcctttttcctctgtcctttggggccttc
aacctggtctactggattgtctatctcaccaaagacaccatggagtccagggaggtgtaa
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