Cyprinus carpio (common carp): 109046746
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Entry
109046746 CDS
T05134
Symbol
mbd3b
Name
(RefSeq) methyl-CpG-binding domain protein 3b isoform X1
KO
K11591
methyl-CpG-binding domain protein 3
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109046746 (mbd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109046746 (mbd3b)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
109046746 (mbd3b)
Chromatin remodeling factors
NuRD complex
109046746 (mbd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
Pardaxin
Motif
Other DBs
NCBI-GeneID:
109046746
NCBI-ProteinID:
XP_042605246
Ensembl:
ENSCCRG00000013220
ENSCCRG00000013537
UniProt:
A0A9Q9XQ59
LinkDB
All DBs
Position
B22:complement(24794344..24800866)
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AA seq
265 aa
AA seq
DB search
MEKNDRGEEEEEEQRRERGEAGRLYSLCPTGKKFRSKPQLARYLGNSMDLSSFDFRTGKM
LMSKLNKNRQRPRYDNNSQTKGKPDLNTSLPVRQTASIFKQPVTKVTNHPSNKVKTDPQK
AIDQPRQLFWEKKLSGLNAFDIAEELVKTMDLPKGLQGVGPGCTDKTLLSAIASALHTSA
APITGQLSAAVEKNPGVWLNTAQPLCKAFIVTDEDIRKQEELVYSVRKRLEEALMADMLA
HVEETSSEGDALKQEGNCNDDKQEV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaacgacagaggtgaggaagaagaggaagaacagaggcgggagaggggggag
gcaggtcgtttgtatagtttgtgccccactgggaagaagttccggagcaagcctcaattg
gcccgttaccttggcaactccatggatctcagctcctttgatttccgcacaggcaagatg
ctcatgagcaaactgaacaagaacagacagagaccccgatatgacaacaatagccagact
aagggcaaacctgacctgaatacgtccctcccagtacgacagacggcctccatcttcaaa
cagcctgtcacaaaagttaccaaccaccccagcaataaggttaaaacagacccacagaag
gccattgaccagcccagacagcttttttgggagaagaagttgagtggcctcaatgccttt
gacatagcagaggagttggtgaaaacaatggatctccccaaaggcttacaaggagtgggc
cctggctgcacagataagaccctgttgtcagctattgccagtgctcttcacaccagtgcg
gcccccatcacgggccagctgtccgccgctgtggagaagaaccccggcgtgtggctcaac
acggctcagcctctctgcaaggccttcatcgtcacagacgaggatatcagaaagcaagag
gagctggtgtacagcgtgcgaaagcgactggaggaggctttgatggccgacatgttggct
cacgtggaagaaacgtctagtgagggtgacgcactcaaacaggaggggaattgcaatgat
gataaacaggaagtatag
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