Cyprinus carpio (common carp): 109046759
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Entry
109046759 CDS
T05134
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109046759 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109046759 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109046759 (nfkb2)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109046759 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Death
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
109046759
NCBI-ProteinID:
XP_018920110
Ensembl:
ENSCCRG00000006553
LinkDB
All DBs
Position
A13
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AA seq
913 aa
AA seq
DB search
MAGALRMDDTQYPMKYVSNTEFMINELQYMHEPFEVKPEPFVPETVHGPYLQIIEEPKQR
GFRFRYECEGPSHGGLPGASSERNRRTYPTVKVSNYLGQARVEVQLVTHTDPPRVHAHSL
VGRHCNDNGICTIDVGPNDLTAQFSNLGILHVTKRGVVEVLTKRLREEKRRIKEPGYKLT
DTEEQAILHEAKELGKSMDLNIVRLKFTAYLQDSNGSFTRALNPVVSNPIYDSKSPNASN
LKISRMDKTSGSVLGGEEIFLLCDKVQKDDIDIRFYEEEDDGGWEAFGDFSPTDVHKQYA
IVFKTPPYRCADITRPVTVFLQLRRKKGGDCSEPKQFTYIPHNQDKEEVQRKRMKALPQP
YDHWRGGPQGGAGAFGGPGSGAGGGGIGGGFQFNHMMDGSGFFTGGCGGFSGGAQMSGSS
PKADGSENQPTNTQTQSGSQMQQQLFQIATSLQNRASLMAKYSASALLQYCSTGDVRPLL
VLQRHLCGVQDENGDTPLHLAIIHQQPVVVQQLIQALSNTPQQKFINKLNKLNQAPLHLA
VITKQPRLVEMLMKTGADPSLLDREGRTALHLAAHIGDETILRLILGLLGERYAHLINSA
DFSGQYPVHLAVKKDGEHCLQLLEEAGAKINMPEQKSGCTALHLAVRDNLLKLACYLITE
LKADVNACTYGGNSPLHFAASQGSPHLCSMLIAAGADKRMENDEPLFFQSSSSSDEDDES
VKNEVDRQLPDHMVQQVHCMSISSERGTFNPRKRPAVGHTPFDLAKCQKVRDLLDGRKGP
KPSSFAHKRTKISTEEANQGLDSEVLTKLCSILIEDHVPWRELAEKLGMLTLSHLYQDSA
SPCQKLLENYQLSGGPVDGLVEALQSLGVSEGVRLLKDSQPREDKQSTDSKADSGFGSQS
IGEEMGNPAVANH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggctggagcactaaggatggatgatacacagtatcccatgaagtatgtgagcaacact
gagtttatgataaatgaacttcaatatatgcacgaaccttttgaggtgaaacctgaaccc
tttgtgccagagacagttcatgggccttacctacagataattgaggaaccaaagcagaga
ggattcagatttcgctatgaatgtgagggcccatcccatggtggtctgccaggggcctcc
agtgagaggaacagaagaacgtatcccacagtcaaggtgtcaaactacttgggtcaagct
cgcgtagaggttcagctagtgacacacacagacccccctcgtgttcacgcgcacagcctt
gtgggtcgtcactgcaatgacaatgggatatgcaccattgatgtcgggcctaatgatctc
acagcacaattcagtaatttaggcatcctccatgtcactaagagaggagtggttgaagta
ttaacgaaaaggctgagagaagagaagcggaggattaaagagcctggatataaacttact
gatacagaagaacaggctattttgcatgaggccaaagaactgggcaaaagcatggaccta
aacattgtgagattaaagttcactgcttacttgcaagacagcaatgggagtttcacaaga
gccttgaatccagttgtctccaaccctatctatgatagtaaatcaccaaatgcttcgaat
ctgaagatctcccgcatggataaaacctctggatcagtgctgggaggagaagagatcttt
ctgctctgtgataaagttcaaaaagacgatattgacattcgtttttatgaggaggaagat
gatggaggatgggaggcatttggagacttctcccctactgatgtccacaaacagtatgca
atcgtgttcaagaccccaccgtaccgctgtgcagatatcacacgtcctgtcacagtcttc
ctgcagctcaggaggaagaagggaggtgactgcagtgaacccaagcagttcacgtacatt
cctcacaatcaagacaaagaagaggtacagaggaagaggatgaaggcacttcctcagccc
tatgatcactggcggggaggacctcaaggaggagcaggggccttcggaggtcctggatct
ggagcaggaggaggtggaattggaggaggttttcaatttaatcatatgatggatggttca
gggtttttcactggtggatgtggtggatttagcggcggggcgcagatgtcaggctcctcc
ccaaaggctgatggatctgagaatcagccgacaaacacacagactcagtctggctctcag
atgcaacagcagctctttcagatcgccacaagtctgcagaatcgtgccagtttgatggca
aagtactcggctagtgctttgttacagtactgcagcacaggggatgtgcgccctctgctg
gtcctgcaaagacatctgtgtggcgtgcaagatgagaacggagacacgcctctgcacttg
gccattatccatcagcaacctgttgtggtgcaacagcttattcaggccctgagcaacacc
ccacagcagaagtttatcaacaaactcaacaagctcaatcaggctccattgcatctggct
gtgatcacaaagcagcccaggttagttgagatgctgatgaaaacgggggcagacccgagc
ctgctggaccgagaaggccggacagcgcttcacttggccgctcacatcggcgatgagacc
atactacgattgatcctgggcctgctgggagagcgctatgcccatttaataaactctgct
gacttctctggtcaatatccagttcatctcgcagtaaagaaagatggagagcactgtctt
caattgttggaggaggcaggagccaagattaacatgccagagcagaaaagtggctgcaca
gcactacacctggcagtgagggacaaccttttaaaactggcctgttatctcattaccgag
ctgaaggctgatgtgaatgcgtgtacatatgggggcaacagtcctcttcactttgctgcc
agtcagggctccccacatctctgctccatgctgatagctgcaggtgctgataaacgcatg
gagaatgacgagcctcttttcttccagagctcgtcgtcatcggatgaagatgacgagagc
gtgaagaatgaagtcgacaggcagcttccagatcacatggttcagcaagttcactgcatg
tcgatatcatctgaaagaggaacatttaacccacgcaagagacctgctgtgggacacaca
ccgtttgacctggccaaatgccaaaaggttagagatcttttagatggcaggaaaggcccc
aagcccagttcattcgcccacaagagaaccaaaatcagcactgaggaagccaaccagggt
ttggacagtgaggtcctcacgaaactgtgcagtattctcattgaagaccacgtaccctgg
agagagctggcggaaaaactgggcatgctcacactctctcacctttaccaggatagtgcc
tcaccctgccagaagcttctcgagaactaccagttgagtggtggtcctgtggacggcctg
gtggaggcgctgcagtctctgggtgtgagtgaaggagtgagactgctgaaagacagccaa
cccagagaggacaagcagagcacagattctaaagcggacagtggctttgggagtcagtcc
attggagaggagatgggaaaccctgcagtggccaatcactga
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