Cyprinus carpio (common carp): 109046783
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Entry
109046783 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109046783
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109046783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109046783
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109046783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
109046783
NCBI-ProteinID:
XP_042600603
Ensembl:
ENSCCRG00000016570
UniProt:
A0A8C2GSI5
LinkDB
All DBs
Position
B19:complement(4315285..4322912)
Genome browser
AA seq
398 aa
AA seq
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MSRVYVGKLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVCDLNGKDL
CGKRVIVEHTIGQRRDGGSRPGRKIVMSRNSDVTAGPQVKEIGSDMVSSDLSVNLLSSRY
GRGGGGERFGPPTRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTNKGRKNEGVIEF
RQYSDMKRALEKLDGTEVNGRKIRLIEDRPGARRRRSYSRSASRSRSRSRRSRRSRSHSR
TSSRSRASGSRSRSRSTSKKAKGRSSRMEESSNGARRGGESARDNSLSCSPPSKKSKREN
KRARSYSRSRSRSRSRSKSENDRDFSRESGSKSQEANKSGDEGRVTERAHRSRAHSRSRS
QTPPDADLQRKSRSKSKSRSHSRSRSYSRSRSRSRSRS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagtttacgtgggaaaattgagctatcgcgccagagagaaagatgtagaaagg
ttttttaaaggctacgggaagatactggaagtggacctgaagaacgggtatgggtttgtg
gagtttgatgacccccgtgatgcagatgacgctgtgtgcgatctgaacggtaaagacctt
tgtgggaagagagtgatcgtggagcacaccataggacagcggcgtgatggcggcagcaga
cctggaagaaaaatagtgatgtcacgtaacagtgatgtcaccgcaggcccacaggtgaag
gagatcggctctgacatggtttcctcagatctgtccgtaaatctgttgagtagtcggtat
ggtcgtggaggaggaggggaaaggttcggcccacccactcgcaccgattacaggctgatt
gtggaaaatctctccagtcgctgcagctggcaggacctgaaggactacatgcgtcaggct
ggtgaggtgacttacgcagacactaacaagggccgcaagaacgagggggtcatcgagttc
aggcagtactcagacatgaaaagagccctggagaaactggacggcaccgaggtcaatgga
aggaagatccggctcatcgaggaccggcctggtgccagacgccgccgctcctactctcgc
agcgcctccaggtctcgctccaggagcaggaggtctcgcaggagccgaagccacagccga
accagtagccgctcaagagcctcaggctcacgatcacgcagcaggtcaaccagcaagaag
gcaaagggcaggagcagtaggatggaggagagcagtaatggagctcgcaggggaggtgaa
agcgctagggataatagcctgagctgcagccccccgagcaaaaagagcaaacgggagaac
aagagggctcgctcctattctagatccaggtcccgatccagatctcgatccaaatcggag
aacgacagggatttctccagagagtctgggtccaagtctcaggaggcgaacaagagcggc
gatgaaggccgggtgactgaaagggcgcaccgctctagagctcattctcgatccagatca
caaacaccaccagatgctgatctgcagaggaaatctagatccaaatccaaatctcgctcg
cattcacgctcgcgatcttattcccgatctcgatcccgctcaaggtcacgttcttaa
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