Cyprinus carpio (common carp): 109046844
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Entry
109046844 CDS
T05134
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109046844 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109046844 (smarcd1)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109046844 (smarcd1)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109046844 (smarcd1)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109046844 (smarcd1)
PBAF complex
109046844 (smarcd1)
GBAF(ncBAF) complex
109046844 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109046844
NCBI-ProteinID:
XP_042568265
UniProt:
A0A8C1P4S5
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Position
A22:complement(4272458..4279844)
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AA seq
512 aa
AA seq
DB search
MAARNVSGFQPATPGGGGAPMGPGPPVAGAGPGMGPGTPSGRMVPGGPQNHMYRPPMPGY
PRPGMPPASRMTPQGPSMGPPGFGASPVSRPGMPVMDPSRKRPPPNQIQQVQQQNRNQHA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLAR
LLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNK
IHETIETINHLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYH
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgtaacgttagtggttttcagcctgcgacacccggaggcggcggagccccg
atggggcccgggcctccggtagccggtgctgggcccggtatgggtcccggtacgccctcg
ggacggatggtacccggcggcccgcagaaccatatgtatcgaccaccgatgcccggatac
ccgagaccgggaatgcctccagccagtcgaatgacccctcagggaccctccatgggaccc
ccaggtttcggggccagtccagtgtcccgccccggtatgccagtcatggacccgtcccgt
aagcgaccgccaccaaatcagatccaacaggtccagcaacagaatcgcaaccaacatgcc
aagaagaagaaaatggcagataaaatcctacctcagagaatccgagagcttgttcccgag
tctcaggcatatatggacctgctggcgttcgagaggaagctggatcagaccataatgcgc
aaaagacttgatattcaggaagctctcaagagacccatcaagcaaaaaagaaaactccgg
atatttatctccaacaccttcaaccctgccaaaccagatgcagaggacggcgaaggaaca
gttgcatcttgggagctgcgtgtggagggacgacttcttgaagacactgctgtgtccaag
tatgaagccaccaagcagaagaggaagttttcttcttttttcaagtctttagtgatcgag
ttggacaaagacttatatggacctgacaatcatttggtggagtggcaccgaaccgctaca
actcaggagacagatggatttcaagtgaagaggccgggagatgttggtgtccgttgtact
gtactgcttatgctggactaccagcctcctcagtttaagttagaccccagacttgcccgg
ttgctggggatccacactcagacccggcccgtgatcattcaggctctgtggcagtacgtg
aagacccacaaactccaggaccctcatgaacgagagttcatcaactgtgataaatacctc
cagcagatcttcgaaacccagaggatgaagttttctgagattcctcaacggctgcatgca
ctactgatgcctcctgagccaatcatcatcaaccatgtcataagcgtggatcccaatgac
cagaagaagacagcatgctacgatatagacgtggaggtggacgacaccctgaagacccag
atgaactctttcctgctgtccaccgccagtcagcaagagattgcaggccttgacaacaag
atccatgagaccatcgaaaccattaaccatctgaagactcaaagggagttcatgttgagc
ttcgcgagagacccgcagggcttcattaatgactggctccagtcccagtgcagagacttg
aagactatgacagatgtggttggaaaccccgaggaggaaaggagagcagagttctaccac
caaccctgggctcaggaggctgtgtgcagatatttctattcaaaggttcagcaaaggaga
caggagctggaacaggctcttggcattcgaaacacataa
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