Cyprinus carpio (common carp): 109046976
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Entry
109046976 CDS
T05134
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109046976 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109046976 (hnrnpa1b)
03041 Spliceosome [BR:
ccar03041
]
109046976 (hnrnpa1b)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109046976 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
109046976 (hnrnpa1b)
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
hnRNP proteins
109046976 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
OB_RNB
Motif
Other DBs
NCBI-GeneID:
109046976
NCBI-ProteinID:
XP_042569489
UniProt:
A0A9Q9VQY2
LinkDB
All DBs
Position
A23:18410253..18415417
Genome browser
AA seq
424 aa
AA seq
DB search
MSKEGQPREPEQLRKLFIGGLSFETTDDSLREYFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSSVCEVDAAMDARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKDDTEENH
LRDYFKEFGKLEAIEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNMRGRGGGGGGGGGGNFNRYGNNGGYNNDFGGSGGGNRDGYFGRGGRSG
GGGGGYGGDCYNNGFGGGDVSESSICERSAALSTAVTRETLISTTPTAEKEFAYMPPLDY
GGYGGGPGNYGGNRGYGGGGGGGGGHGYGNQGGGYGGGGSNSGGGYNDNYNNGNGNFGGG
NFGGGGGGGGNYSDFGNYNSQQSNYGPMKGNFGGGGGRNSGPYGGGYGGGSGGGYGGGSG
GRRF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagagggccagccacgtgagcctgagcagctgcggaagctcttcattggaggg
ctcagctttgaaaccacagacgatagtttgcgagaatattttgaacaatggggcacctta
acggattgtgtggtgatgaaagatccgaacaccaagcgctccaggggctttgggttcgtc
acttattccagcgtgtgtgaagtcgatgctgctatggatgcacgaccccacaaggttgat
ggtaggctggtagagcccaaacgagccgtgtctcgagaggactccaacaagccattcgct
cacacaaccgtgaagaagatctttgtgggcggcattaaggatgacaccgaggagaaccat
cttcgtgattacttcaaggagtttggcaaacttgaggccattgagattatggttgaccac
aagaccggaaacaaaagaggcttcgcctttgttacgtttgatgaccatgactccgttgat
cgtatcgtcattcagaaataccacactgtgaatgggcacaactgtgaagtcagaaaagct
ctgtctaaacaagagatgcaaaacactggcatgaacatgagaggccgtggtggtggtgga
ggaggaggtggtggtggaaacttcaacagatatggcaacaatggcggctacaacaatgac
tttggaggcagtggaggtggcaaccgtgatggatattttggaagaggaggcagaagtggt
ggaggtggcggtggttatggaggcgactgctacaacaatggttttggcggcggagatgtg
tctgagagcagcatttgtgagcggagcgctgctttgtctacagctgttaccagggaaacc
ttaatctctaccactccaacagcagagaaagaatttgcatatatgccaccactggactat
ggtggttatggtggcggtcctggtaactatggtggaaaccgtggatatggaggaggtggt
ggcggcggaggaggacatggttatggcaaccagggcggtggttatggtggtggcggcagc
aacagcggtggtggctataatgacaattacaacaatggcaatggaaactttggaggtggc
aacttcggaggtggcggcggtggaggtggtaactacagtgactttggcaactataacagc
cagcagtccaactatggtcccatgaaagggaactttggaggtggtggaggaagaaacagt
ggcccatatggtggtggctacggtggtggatctggtggtggatatggaggcggctctggt
ggtagacggttttaa
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